RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 GPR35Q9HC97 309 aa5.65□□□□□ -1.5
RAB4A-204ENST00000489342 VSX1Q9NZR4 365 aaPredicted RBP5.65□□□□□ -1.5
RAB4A-204ENST00000489342 TMX2Q9Y320 296 aa5.65□□□□□ -1.5
RAB4A-204ENST00000489342 MYO15AQ9UKN7 3530 aa5.65□□□□□ -1.51
RAB4A-204ENST00000489342 ZFHX2Q9C0A1 2572 aaPredicted RBP5.64□□□□□ -1.51
RAB4A-204ENST00000489342 A0A0B4J269 797 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 KIF28PB7ZC32 967 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 WDR46O15213 610 aaKnown RBP5.64□□□□□ -1.51
RAB4A-204ENST00000489342 ZBED4O75132 1171 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 MATN4O95460 622 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 CHRM2P08172 466 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 PPP3CBP16298 524 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 NDUFV1P49821 464 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 DEFB103AP81534 67 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 GABPAQ06546 454 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 TUBB3Q13509 450 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 ZNF267Q14586 743 aaPredicted RBP5.64□□□□□ -1.51
RAB4A-204ENST00000489342 TCTN1Q2MV58 587 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 PRR16Q569H4 304 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 ATAT1Q5SQI0 421 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 SLC9C2Q5TAH2 1124 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 KAZNQ674X7 775 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 VWA1Q6PCB0 445 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 TSHZ1Q6ZSZ6 1077 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 TMEM179Q6ZVK1 233 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 USP37Q86T82 979 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 TLK2Q86UE8 772 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 PPP1R3BQ86XI6 285 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 FBXO16Q8IX29 292 aaPredicted RBP5.64□□□□□ -1.51
RAB4A-204ENST00000489342 PRSS33Q8NF86 280 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 LRIG1Q96JA1 1093 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 PGBD1Q96JS3 809 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 CGRRF1Q99675 332 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 RIOK1Q9BRS2 568 aaKnown RBP5.64□□□□□ -1.51
RAB4A-204ENST00000489342 C17orf80Q9BSJ5 609 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 CRNKL1Q9BZJ0 848 aaKnown RBP5.64□□□□□ -1.51
RAB4A-204ENST00000489342 TINAGL1Q9GZM7 467 aaPredicted RBP5.64□□□□□ -1.51
RAB4A-204ENST00000489342 SYNPO2LQ9H987 977 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 ZIM2Q9NZV7 527 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 NRBP1Q9UHY1 535 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 MUTYHQ9UIF7 546 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 DBNLQ9UJU6 430 aaKnown RBP5.64□□□□□ -1.51
RAB4A-204ENST00000489342 AGAP1Q9UPQ3 857 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 RAD54BQ9Y620 910 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 SALL3Q9BXA9 1300 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 ZNF532Q9HCE3 1301 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 COL11A1P12107 1806 aaPredicted RBP5.64□□□□□ -1.51
RAB4A-204ENST00000489342 SCN5AQ14524 2016 aa5.64□□□□□ -1.51
RAB4A-204ENST00000489342 GOLIM4O00461 696 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 DCXO43602 365 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 SOAT2O75908 522 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 ALDH2P05091 517 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 ACTN1P12814 892 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 ALADP13716 330 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 CST5P28325 142 aaPredicted RBP5.63□□□□□ -1.51
RAB4A-204ENST00000489342 IL12RB1P42701 662 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 SOX8P57073 446 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 NKX6-1P78426 367 aaPredicted RBP5.63□□□□□ -1.51
RAB4A-204ENST00000489342 SIM1P81133 766 aaPredicted RBP5.63□□□□□ -1.51
RAB4A-204ENST00000489342 IKQ13123 557 aaPredicted RBP5.63□□□□□ -1.51
RAB4A-204ENST00000489342 KHDC1LQ5JSQ8 128 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 TAF2Q6P1X5 1199 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 TPH2Q8IWU9 490 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 SIMC1Q8NDZ2 872 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 FAM46DQ8NEK8 389 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 POC1BQ8TC44 478 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 TFAP2BQ92481 460 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 SLF1Q9BQI6 1058 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 TEX13BQ9BXU2 312 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 TPSD1Q9BZJ3 242 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 API5Q9BZZ5 524 aaKnown RBP5.63□□□□□ -1.51
RAB4A-204ENST00000489342 UPF3AQ9H1J1 476 aaKnown RBP5.63□□□□□ -1.51
RAB4A-204ENST00000489342 ALDH8A1Q9H2A2 487 aaPredicted RBP5.63□□□□□ -1.51
RAB4A-204ENST00000489342 ABHD16BQ9H3Z7 469 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 IL1RAPL2Q9NP60 686 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 CLIP2Q9UDT6 1046 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 PCDHA6Q9UN73 950 aa5.63□□□□□ -1.51
RAB4A-204ENST00000489342 ZNF236Q9UL36 1845 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.62□□□□□ -1.51
RAB4A-204ENST00000489342 CCDC151A5D8V7 595 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 PRSS29PA6NIE9 313 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 F5H6K3 240 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 MPPED1O15442 326 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 MBD4O95243 580 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 S100BP04271 92 aaPredicted RBP5.62□□□□□ -1.51
RAB4A-204ENST00000489342 IQCF3P0C7M6 154 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 LPOP22079 712 aaPredicted RBP5.62□□□□□ -1.51
RAB4A-204ENST00000489342 RARRES1P49788 294 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 ITIH3Q06033 890 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 KLRC3Q07444 240 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 LAYNQ6UX15 382 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 RD3Q7Z3Z2 195 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 DAAM2Q86T65 1068 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 AACSQ86V21 672 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 ADGRG3Q86Y34 549 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 DENND1CQ8IV53 801 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 MYCBPAPQ8TBZ2 947 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 SH2D4AQ9H788 454 aa5.62□□□□□ -1.51
RAB4A-204ENST00000489342 ETAA1Q9NY74 926 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms