RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SLC11A2P49281 568 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 AFF3P51826 1226 aaKnown RBP19.16■□□□□ 0.66
HDAC6-231ENST00000488905 STIM1Q13586 685 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 STILQ15468 1287 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 PIK3R6Q5UE93 754 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 GLRX5Q86SX6 157 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 PPM1KQ8N3J5 372 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 CLEC4CQ8WTT0 213 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 CEP63Q96MT8 703 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 ZSWIM1Q9BR11 485 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 IRX2Q9BZI1 471 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-231ENST00000488905 TM7SF3Q9NS93 570 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-231ENST00000488905 SLCO1B1Q9Y6L6 691 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 GOLGA4Q13439 2230 aaKnown RBP19.16■□□□□ 0.66
HDAC6-231ENST00000488905 APC2O95996 2303 aa19.16■□□□□ 0.66
HDAC6-231ENST00000488905 A0A1B0GVT2 93 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 SEMA4FO95754 770 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 ATP5BP06576 529 aaKnown RBP19.15■□□□□ 0.66
HDAC6-231ENST00000488905 BRD2P25440 801 aaKnown RBP19.15■□□□□ 0.66
HDAC6-231ENST00000488905 SLC6A4P31645 630 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 CD70P32970 193 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 RPS14P62263 151 aaKnown RBP19.15■□□□□ 0.66
HDAC6-231ENST00000488905 ZBTB16Q05516 673 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 RING1Q06587 406 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 CNGA2Q16280 664 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 HLA-BQ31612 363 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 TTC31Q49AM3 519 aaPredicted RBP19.15■□□□□ 0.66
HDAC6-231ENST00000488905 CCDC40Q4G0X9 1142 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 UNC45BQ8IWX7 931 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 PNPLA1Q8N8W4 532 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 ZNF557Q8N988 423 aaPredicted RBP19.15■□□□□ 0.66
HDAC6-231ENST00000488905 SETD7Q8WTS6 366 aaKnown RBP19.15■□□□□ 0.66
HDAC6-231ENST00000488905 GOLGA1Q92805 767 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 KAT5Q92993 513 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 PRICKLE1Q96MT3 831 aaPredicted RBP19.15■□□□□ 0.66
HDAC6-231ENST00000488905 PRSS16Q9NQE7 514 aa19.15■□□□□ 0.66
HDAC6-231ENST00000488905 HOOK1Q9UJC3 728 aaKnown RBP19.15■□□□□ 0.66
HDAC6-231ENST00000488905 APOBEC2Q9Y235 224 aaKnown RBP19.15■□□□□ 0.66
HDAC6-231ENST00000488905 GOLGA6L7A0A1B0GV03 622 aa19.14■□□□□ 0.65
HDAC6-231ENST00000488905 RNF225M0QZC1 329 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-231ENST00000488905 ACSL4O60488 711 aa19.14■□□□□ 0.65
HDAC6-231ENST00000488905 FBXO21O94952 628 aa19.14■□□□□ 0.65
HDAC6-231ENST00000488905 DNTTP04053 509 aa19.14■□□□□ 0.65
HDAC6-231ENST00000488905 POLR2EP19388 210 aaKnown RBP19.14■□□□□ 0.65
HDAC6-231ENST00000488905 TBX4P57082 545 aa19.14■□□□□ 0.65
HDAC6-231ENST00000488905 MFN1Q8IWA4 741 aa19.14■□□□□ 0.65
HDAC6-231ENST00000488905 HJURPQ8NCD3 748 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-231ENST00000488905 BAHD1Q8TBE0 780 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-231ENST00000488905 HSFY1Q96LI6 401 aa19.14■□□□□ 0.65
HDAC6-231ENST00000488905 TIGD1Q96MW7 591 aa19.14■□□□□ 0.65
HDAC6-231ENST00000488905 BTBD1Q9H0C5 482 aa19.14■□□□□ 0.65
HDAC6-231ENST00000488905 PCDHGB2Q9Y5G2 931 aa19.14■□□□□ 0.65
HDAC6-231ENST00000488905 TYW5A2RUC4 315 aaKnown RBP19.13■□□□□ 0.65
HDAC6-231ENST00000488905 FLRT2O43155 660 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 CALCAP01258 141 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 CD44P16070 742 aaKnown RBP19.13■□□□□ 0.65
HDAC6-231ENST00000488905 CSNK1EP49674 416 aaKnown RBP19.13■□□□□ 0.65
HDAC6-231ENST00000488905 GCNT1Q02742 428 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 CETN1Q12798 172 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 ZNF776Q68DI1 518 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-231ENST00000488905 NADSYN1Q6IA69 706 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 LMO3Q8TAP4 145 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 AZIN2Q96A70 460 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 BIRC7Q96CA5 298 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 DHTKD1Q96HY7 919 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-231ENST00000488905 FCRL2Q96LA5 508 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-231ENST00000488905 SERPINB11Q96P15 392 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 TM9SF3Q9HD45 589 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 OSGEPQ9NPF4 335 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 ADAMTS20P59510 1910 aa19.13■□□□□ 0.65
HDAC6-231ENST00000488905 SMG1Q96Q15 3661 aaKnown RBP19.12■□□□□ 0.65
HDAC6-231ENST00000488905 BAHCC1Q9P281 2608 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 P4HA2O15460 535 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 CAPNS1P04632 268 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 PPP1R2P41236 205 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 GRIA4P48058 902 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 NNTQ13423 1086 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 TEAD4Q15561 434 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 ISM2Q6H9L7 571 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 SLCO6A1Q86UG4 719 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 PROSER1Q86XN7 944 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 ARHGEF19Q8IW93 802 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 DQX1Q8TE96 717 aaKnown RBP19.12■□□□□ 0.65
HDAC6-231ENST00000488905 MYO19Q96H55 970 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 LMLNQ96KR4 655 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 DDX50Q9BQ39 737 aaKnown RBP19.12■□□□□ 0.65
HDAC6-231ENST00000488905 MIS12Q9H081 205 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 SGK2Q9HBY8 427 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 STIM2Q9P246 746 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 SUN2Q9UH99 717 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 MAN1B1Q9UKM7 699 aa19.12■□□□□ 0.65
HDAC6-231ENST00000488905 FYNP06241 537 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 RPS24P62847 133 aaKnown RBP19.11■□□□□ 0.65
HDAC6-231ENST00000488905 SCAPQ12770 1279 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 CDH18Q13634 790 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 KIF19Q2TAC6 998 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 KLHL10Q6JEL2 608 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 TTI2Q6NXR4 508 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 DBX2Q6ZNG2 339 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms