RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 CWC15Q9P013 229 aaKnown RBP7.82□□□□□ -1.16
APOBEC3A-203ENST00000488758 OR12D3Q9UGF7 316 aa7.82□□□□□ -1.16
APOBEC3A-203ENST00000488758 FEZ2Q9UHY8 353 aaPredicted RBP7.82□□□□□ -1.16
APOBEC3A-203ENST00000488758 PCDHB3Q9Y5E6 796 aa7.82□□□□□ -1.16
APOBEC3A-203ENST00000488758 MYO9BQ13459 2157 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 SOBPA7XYQ1 873 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 ACSL4O60488 711 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 PHF2O75151 1096 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 IGLV3-27P01718 113 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 CKMP06732 381 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 RHOXF2BP0C7M4 288 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 IRF1P10914 325 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 GOT1P17174 413 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 AMPD1P23109 780 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 EPHB2P29323 1055 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 CHRNA3P32297 505 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 HTR7P34969 479 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 GTF2F1P35269 517 aaKnown RBP eCLIP7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 HCAR3P49019 387 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 SLC11A2P49281 568 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 EPHA5P54756 1037 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 MLLT6P55198 1093 aaPredicted RBP7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 LMNB2Q03252 620 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 KLF1Q13351 362 aaPredicted RBP7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 SNX1Q13596 522 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 CCNG2Q16589 344 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 TCEAL5Q5H9L2 206 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 C8orf74Q6P047 294 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 C1orf228Q6PIY5 440 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 RFX8Q6ZV50 586 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 BZW1Q7L1Q6 419 aaKnown RBP7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 CCDC105Q8IYK2 499 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 EFHBQ8N7U6 833 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 C12orf76Q8N812 135 aaPredicted RBP7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 PRELID2Q8N945 189 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 PCDH19Q8TAB3 1148 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 SHKBP1Q8TBC3 707 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 TSC1Q92574 1164 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 P3H4Q92791 437 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 HAUS1Q96CS2 278 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 FAF2Q96CS3 445 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 TBC1D31Q96DN5 1066 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 CYP2S1Q96SQ9 504 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 DDX50Q9BQ39 737 aaKnown RBP7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 RHOXF2Q9BQY4 288 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 HERPUD2Q9BSE4 406 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 FRMD8P1Q9BZ68 369 aaPredicted RBP7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 DCLK3Q9C098 648 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 DDX47Q9H0S4 455 aaKnown RBP7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 PRDM12Q9H4Q4 367 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 SLITRK6Q9H5Y7 841 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 TASP1Q9H6P5 420 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 LRRC19Q9H756 370 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 CATSPERBQ9H7T0 1116 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 SMPD4Q9NXE4 827 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 LSM7Q9UK45 103 aaKnown RBP7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 MRPS23Q9Y3D9 190 aaKnown RBP7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 NR2E1Q9Y466 385 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 SNX10Q9Y5X0 201 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 HS3ST4Q9Y661 456 aa7.81□□□□□ -1.16
APOBEC3A-203ENST00000488758 CLUHO75153 1309 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 COL4A4P53420 1690 aaPredicted RBP7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 TMEM265A0A087WTH1 108 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 FAM72CH0Y354 149 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 H7C0C1 242 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 I6L893 689 aaPredicted RBP7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 APOC4-APOC2K7ER74 178 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 FGF10O15520 208 aaPredicted RBP7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 STC2O76061 302 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 LRIG2O94898 1065 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 OLFM2O95897 454 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 APOC2P02655 101 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 ERCC2P18074 760 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 TGM2P21980 687 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 CORO1AP31146 461 aaKnown RBP7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 AVPR1AP37288 418 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 COILP38432 576 aaPredicted RBP7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 GGCXP38435 758 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 ATP5OP48047 213 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 FNTAP49354 379 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 KCNQ1P51787 676 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 TERF1P54274 439 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 NTHL1P78549 312 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 SLC7A9P82251 487 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 RBM10P98175 930 aaKnown RBP7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 DR1Q01658 176 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 NRG1Q02297 640 aaPredicted RBP7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 ADCY2Q08462 1091 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 HYAL1Q12794 435 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 BYSLQ13895 437 aaKnown RBP7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 SIX1Q15475 284 aaPredicted RBP7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 TEAD2Q15562 447 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 CYP1B1Q16678 543 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 ERCC6LQ2NKX8 1250 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 GLE1Q53GS7 698 aaKnown RBP7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 MS4A13Q5J8X5 152 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 RARS2Q5T160 578 aaKnown RBP7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 FAM72AQ5TYM5 149 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 RAP1GAP2Q684P5 730 aa7.8□□□□□ -1.16
APOBEC3A-203ENST00000488758 SLC9A4Q6AI14 798 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms