RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 SLC39A13Q96H72 371 aa23.46■■□□□ 1.35
PTPN4-211ENST00000488279 ACP6Q9NPH0 428 aa23.46■■□□□ 1.35
PTPN4-211ENST00000488279 APEX2Q9UBZ4 518 aa23.46■■□□□ 1.35
PTPN4-211ENST00000488279 TNRC6BQ9UPQ9 1833 aaKnown RBP23.46■■□□□ 1.35
PTPN4-211ENST00000488279 E5RJQ4 531 aa23.45■■□□□ 1.34
PTPN4-211ENST00000488279 PAPSS1O43252 624 aaPredicted RBP23.45■■□□□ 1.34
PTPN4-211ENST00000488279 YWHAZP63104 245 aaKnown RBP23.45■■□□□ 1.34
PTPN4-211ENST00000488279 ARHGAP44Q17R89 818 aa23.45■■□□□ 1.34
PTPN4-211ENST00000488279 WFDC5Q8TCV5 224 aa23.45■■□□□ 1.34
PTPN4-211ENST00000488279 THAP9Q9H5L6 903 aa23.45■■□□□ 1.34
PTPN4-211ENST00000488279 FBRSQ9HAH7 460 aa23.45■■□□□ 1.34
PTPN4-211ENST00000488279 POPDC2Q9HBU9 364 aa23.45■■□□□ 1.34
PTPN4-211ENST00000488279 SUN2Q9UH99 717 aa23.45■■□□□ 1.34
PTPN4-211ENST00000488279 PI4KAP42356 2102 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 GTPBP10A4D1E9 387 aaKnown RBP23.44■■□□□ 1.34
PTPN4-211ENST00000488279 METTL12A8MUP2 240 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 FOXC1Q12948 553 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 ST3GAL2Q16842 350 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 TPD52L1Q16890 204 aaPredicted RBP23.44■■□□□ 1.34
PTPN4-211ENST00000488279 MS4A13Q5J8X5 152 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 PIP4P1Q86T03 277 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 TAC4Q86UU9 113 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 IRF2BP1Q8IU81 584 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 ZNF366Q8N895 744 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 MIR1-1HGQ9H1L0 117 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 LHX5Q9H2C1 402 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 PRSS16Q9NQE7 514 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 CHMP5Q9NZZ3 219 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 CYTH4Q9UIA0 394 aa23.44■■□□□ 1.34
PTPN4-211ENST00000488279 A0A1B0GTW7 788 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 BECN2A8MW95 431 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 MOCS2O96007 188 aaPredicted RBP23.43■■□□□ 1.34
PTPN4-211ENST00000488279 APOEP02649 317 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 PON1P27169 355 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 MTIF2P46199 727 aaKnown RBP23.43■■□□□ 1.34
PTPN4-211ENST00000488279 RPS24P62847 133 aaKnown RBP23.43■■□□□ 1.34
PTPN4-211ENST00000488279 PDCLQ13371 301 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 DCAF12L1Q5VU92 463 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 FAM124AQ86V42 546 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 CARNMT1Q8N4J0 409 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 OR2I1PQ8NGU4 316 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 TTC17Q96AE7 1141 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 LMLNQ96KR4 655 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 PRICKLE1Q96MT3 831 aaPredicted RBP23.43■■□□□ 1.34
PTPN4-211ENST00000488279 ZDHHC5Q9C0B5 715 aa23.43■■□□□ 1.34
PTPN4-211ENST00000488279 NUCKS1Q9H1E3 243 aaKnown RBP23.43■■□□□ 1.34
PTPN4-211ENST00000488279 DNAAF2Q9NVR5 837 aaKnown RBP23.43■■□□□ 1.34
PTPN4-211ENST00000488279 FRYQ5TBA9 3013 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 CEP192Q8TEP8 1941 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 TRUB2O95900 331 aaKnown RBP23.42■■□□□ 1.34
PTPN4-211ENST00000488279 C7P10643 843 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 ST8SIA6P61647 398 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 APBA1Q02410 837 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 ZBTB16Q05516 673 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 SLC14A1Q13336 389 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 CDH18Q13634 790 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 DCAF6Q58WW2 860 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 ZC3H12AQ5D1E8 599 aaKnown RBP23.42■■□□□ 1.34
PTPN4-211ENST00000488279 CFAP52Q8N1V2 620 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 SHC3Q92529 594 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 MYEOVQ96EZ4 313 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 PCED1AQ9H1Q7 454 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 SLC12A6Q9UHW9 1150 aa23.42■■□□□ 1.34
PTPN4-211ENST00000488279 ASLP04424 464 aa23.41■■□□□ 1.34
PTPN4-211ENST00000488279 CSKP41240 450 aa23.41■■□□□ 1.34
PTPN4-211ENST00000488279 RPS14P62263 151 aaKnown RBP23.41■■□□□ 1.34
PTPN4-211ENST00000488279 PTK2Q05397 1052 aa23.41■■□□□ 1.34
PTPN4-211ENST00000488279 SMYD5Q6GMV2 418 aa23.41■■□□□ 1.34
PTPN4-211ENST00000488279 ZCCHC9Q8N567 271 aaKnown RBP23.41■■□□□ 1.34
PTPN4-211ENST00000488279 PPP1R13BQ96KQ4 1090 aa23.41■■□□□ 1.34
PTPN4-211ENST00000488279 BTN2A3PQ96KV6 586 aa23.41■■□□□ 1.34
PTPN4-211ENST00000488279 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.41■■□□□ 1.34
PTPN4-211ENST00000488279 TJP2Q9UDY2 1190 aa23.41■■□□□ 1.34
PTPN4-211ENST00000488279 XPO7Q9UIA9 1087 aaKnown RBP23.41■■□□□ 1.34
PTPN4-211ENST00000488279 ASCC3Q8N3C0 2202 aaKnown RBP23.41■■□□□ 1.34
PTPN4-211ENST00000488279 H0Y626 953 aa23.4■■□□□ 1.34
PTPN4-211ENST00000488279 BCAT2O15382 392 aaPredicted RBP23.4■■□□□ 1.34
PTPN4-211ENST00000488279 LUC7L3O95232 432 aaKnown RBP23.4■■□□□ 1.34
PTPN4-211ENST00000488279 IGLV3-25P01717 112 aa23.4■■□□□ 1.34
PTPN4-211ENST00000488279 DNTTP04053 509 aa23.4■■□□□ 1.34
PTPN4-211ENST00000488279 GLI1P08151 1106 aa23.4■■□□□ 1.34
PTPN4-211ENST00000488279 CDK17Q00537 523 aa23.4■■□□□ 1.34
PTPN4-211ENST00000488279 GRIK2Q13002 908 aa23.4■■□□□ 1.34
PTPN4-211ENST00000488279 TAF5Q15542 800 aa23.4■■□□□ 1.34
PTPN4-211ENST00000488279 LGI2Q8N0V4 545 aa23.4■■□□□ 1.34
PTPN4-211ENST00000488279 WDTC1Q8N5D0 677 aa23.4■■□□□ 1.34
PTPN4-211ENST00000488279 NOX5Q96PH1 765 aa23.4■■□□□ 1.34
PTPN4-211ENST00000488279 KIAA1522Q9P206 1035 aaPredicted RBP23.4■■□□□ 1.34
PTPN4-211ENST00000488279 PCDHGC3Q9UN70 934 aa23.4■■□□□ 1.34
PTPN4-211ENST00000488279 MOCS3O95396 460 aa23.39■■□□□ 1.33
PTPN4-211ENST00000488279 SLC2A3P11169 496 aa23.39■■□□□ 1.33
PTPN4-211ENST00000488279 CD59P13987 128 aa23.39■■□□□ 1.33
PTPN4-211ENST00000488279 ACSL1P33121 698 aa23.39■■□□□ 1.33
PTPN4-211ENST00000488279 SNX16P57768 344 aa23.39■■□□□ 1.33
PTPN4-211ENST00000488279 SIM1P81133 766 aaPredicted RBP23.39■■□□□ 1.33
PTPN4-211ENST00000488279 HNRNPDQ14103 355 aaKnown RBP23.39■■□□□ 1.33
PTPN4-211ENST00000488279 TTC31Q49AM3 519 aaPredicted RBP23.39■■□□□ 1.33
PTPN4-211ENST00000488279 FSCBQ5H9T9 825 aa23.39■■□□□ 1.33
PTPN4-211ENST00000488279 EFHC1Q5JVL4 640 aa23.39■■□□□ 1.33
PTPN4-211ENST00000488279 RAP1GAP2Q684P5 730 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms