RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 CHST13Q8NET6 341 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.82■□□□□ 0.28
GCOM1-210ENST00000488175 ACMSDQ8TDX5 336 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 COPS5Q92905 334 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 QKIQ96PU8 341 aaKnown RBP eCLIP16.82■□□□□ 0.28
GCOM1-210ENST00000488175 KCTD15Q96SI1 283 aaPredicted RBP16.82■□□□□ 0.28
GCOM1-210ENST00000488175 GCOM2Q9BZD3 368 aaPredicted RBP16.82■□□□□ 0.28
GCOM1-210ENST00000488175 OCEL1Q9H607 264 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 STN1Q9H668 368 aaKnown RBP16.82■□□□□ 0.28
GCOM1-210ENST00000488175 DNAJC28Q9NX36 388 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 MTMR10Q9NXD2 777 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 SEPT10Q9P0V9 454 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 AP4E1Q9UPM8 1137 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 RLFQ13129 1914 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 H3BNX3 289 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 GOT1P17174 413 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 ATICP31939 592 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 ZNF280AP59817 542 aaPredicted RBP16.82■□□□□ 0.28
GCOM1-210ENST00000488175 BTKQ06187 659 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 INCA1Q0VD86 236 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 TMEM132DQ14C87 1099 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 SLC9B1Q4ZJI4 515 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 PLD6Q8N2A8 252 aaKnown RBP16.82■□□□□ 0.28
GCOM1-210ENST00000488175 C7orf31Q8N865 590 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 NDNQ99608 321 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 MRPL45Q9BRJ2 306 aaKnown RBP16.82■□□□□ 0.28
GCOM1-210ENST00000488175 UBE2OQ9C0C9 1292 aaKnown RBP16.82■□□□□ 0.28
GCOM1-210ENST00000488175 SYBUQ9NX95 663 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 ZNF112Q9UJU3 913 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 G3BP2Q9UN86 482 aaKnown RBP16.82■□□□□ 0.28
GCOM1-210ENST00000488175 INPP5FQ9Y2H2 1132 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 TBC1D30Q9Y2I9 924 aa16.82■□□□□ 0.28
GCOM1-210ENST00000488175 SF3B1O75533 1304 aaKnown RBP eCLIP16.81■□□□□ 0.28
GCOM1-210ENST00000488175 HCRTO43612 131 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 COX4I1P13073 169 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 GRK2P25098 689 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 MSX2P35548 267 aaPredicted RBP16.81■□□□□ 0.28
GCOM1-210ENST00000488175 FOLH1Q04609 750 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 DYNC1I2Q13409 638 aaKnown RBP16.81■□□□□ 0.28
GCOM1-210ENST00000488175 TREML2Q5T2D2 321 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 STEAP4Q687X5 459 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 NCBP2-AS2Q69YL0 99 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 NAPRTQ6XQN6 538 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 NCSTNQ92542 709 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 CXCL16Q9H2A7 254 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 DPP3Q9NY33 737 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 CLIC5Q9NZA1 410 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 TXNDC16Q9P2K2 825 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 GJA3Q9Y6H8 435 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 A0A087WZ62 844 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 GOLGA8QA0A0J9YX86 632 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 GOLGA8OA6NCC3 632 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 GOLGA8NF8WBI6 632 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 PGK2P07205 417 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 CPA3P15088 417 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 SERPINB5P36952 375 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 DPYSL2Q16555 572 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 C4orf22Q6V702 233 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 MAPK15Q8TD08 544 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 NMD3Q96D46 503 aaKnown RBP16.81■□□□□ 0.28
GCOM1-210ENST00000488175 FDXACB1Q9BRP7 624 aaPredicted RBP16.81■□□□□ 0.28
GCOM1-210ENST00000488175 VCX3BQ9H321 246 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 VRTNQ9H8Y1 702 aa16.81■□□□□ 0.28
GCOM1-210ENST00000488175 MAGED2Q9UNF1 606 aaPredicted RBP16.81■□□□□ 0.28
GCOM1-210ENST00000488175 GAS2O43903 313 aaKnown RBP16.8■□□□□ 0.28
GCOM1-210ENST00000488175 EDNRBP24530 442 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 PHKA2P46019 1235 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 GMPSP49915 693 aaPredicted RBP16.8■□□□□ 0.28
GCOM1-210ENST00000488175 CYS1Q717R9 158 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 KBTBD6Q86V97 674 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 ICA1LQ8NDH6 482 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 JADE3Q92613 823 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 SPATA33Q96N06 139 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 OLFM3Q96PB7 478 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 LENG8Q96PV6 779 aaPredicted RBP16.8■□□□□ 0.28
GCOM1-210ENST00000488175 CCDC28BQ9BUN5 200 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 SLC4A5Q9BY07 1137 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 PDZD7Q9H5P4 517 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 VCX3AQ9NNX9 186 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 RNF19AQ9NV58 838 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 PCDHGB4Q9UN71 923 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 NME7Q9Y5B8 376 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 PCDHGB5Q9Y5G0 923 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 PHIPQ8WWQ0 1821 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 A0A0A0MRY4 1105 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 AIM2O14862 343 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 PABPC4LP0CB38 370 aaKnown RBP16.8■□□□□ 0.28
GCOM1-210ENST00000488175 HARS2P49590 506 aaKnown RBP16.8■□□□□ 0.28
GCOM1-210ENST00000488175 DLG2Q15700 870 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 DBN1Q16643 649 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 AMHR2Q16671 573 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 SOWAHAQ2M3V2 549 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 TMEM110Q86TL2 294 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 EGFL6Q8IUX8 553 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 HACE1Q8IYU2 909 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 NAT14Q8WUY8 206 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 SLC35F5Q8WV83 523 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 SPATA13Q96N96 652 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 OR52B2Q96RD2 323 aa16.8■□□□□ 0.28
GCOM1-210ENST00000488175 CAB39LQ9H9S4 337 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms