RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 TRIM43BA6NCK2 446 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 EDF1O60869 148 aaKnown RBP8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 MMP10P09238 476 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 NPY2RP49146 381 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 TMEM119Q4V9L6 283 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 MYO1HQ8N1T3 1032 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 FAM13CQ8NE31 585 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 APOL2Q9BQE5 337 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 MTG1Q9BT17 334 aaPredicted RBP8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 GPATCH2LQ9NWQ4 482 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 DPP3Q9NY33 737 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 CDH9Q9ULB4 789 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 PNMA8BQ9ULN7 279 aaPredicted RBP8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 RWDD3Q9Y3V2 267 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 UMODL1Q5DID0 1318 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 SPATA31A3Q5VYP0 1347 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 E9PCH4 1651 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 NPTXRO95502 500 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 GLP2RO95838 553 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 VIL1P09327 827 aaKnown RBP8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 NEK3P51956 506 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 LPIN1Q14693 890 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 WDR49Q8IV35 697 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 INPP4AQ96PE3 977 aaPredicted RBP8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 RIBC2Q9H4K1 309 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 GPRC5CQ9NQ84 441 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 HPS4Q9NQG7 708 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 PLA2G6O60733 806 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 PIGNO95427 931 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 CYBBP04839 570 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 TAF6P49848 677 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 ZNF268Q14587 947 aaPredicted RBP8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 LIN52Q52LA3 116 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 ZSWIM2Q8NEG5 633 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 ZNF606Q8WXB4 792 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 PRKD2Q9BZL6 878 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 SPAG4Q9NPE6 437 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 ARHGEF3Q9NR81 526 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 EHD3Q9NZN3 535 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 NCANO14594 1321 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 DPPA5A6NC42 116 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 RCCD1A6NED2 376 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 TRIM38O00635 465 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 CHADO15335 359 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 HBP1O60381 514 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 DNAJB2P25686 324 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 BAG6P46379 1132 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 CCNG1P51959 295 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 TNK2Q07912 1038 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 DGCR6Q14129 220 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 DPYSL3Q14195 570 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 ZNF605Q86T29 641 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 KRT78Q8N1N4 520 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 FNDC5Q8NAU1 212 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 RP9Q8TA86 221 aaKnown RBP8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 ACMSDQ8TDX5 336 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 CINPQ9BW66 212 aaPredicted RBP8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 USP32Q8NFA0 1604 aa8.44□□□□□ -1.06
MCF2L2-212ENST00000488149 MGAT4DA6NG13 374 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 BIRC5O15392 142 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 RECQL5O94762 991 aaPredicted RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 JCHAINP01591 159 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 BMP6P22004 513 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 PTPN11Q06124 597 aaPredicted RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 SPIRE1Q08AE8 756 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 BST1Q10588 318 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 PDIA6Q15084 440 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 RNF220Q5VTB9 566 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 CASP12Q6UXS9 341 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 CHSY1Q86X52 802 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 LRRC71Q8N4P6 559 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 ZNF276Q8N554 614 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 PRELID2Q8N945 189 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 HTR3CQ8WXA8 447 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 CENPIQ92674 756 aaPredicted RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 SLCO1B3Q9NPD5 702 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 ABCB10Q9NRK6 738 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 NRXN1Q9ULB1 1477 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 CEMIPQ8WUJ3 1361 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 H3BNX3 289 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 CRTAMO95727 393 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 KRT6AP02538 564 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 ALOX15P16050 662 aaPredicted RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 MYL12AP19105 171 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 MGAT1P26572 445 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 GRIA3P42263 894 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 BNC1Q01954 994 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 EFCAB12Q6NXP0 572 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 UBXN6Q9BZV1 441 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 ENTPD7Q9NQZ7 604 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 TBC1D13Q9NVG8 400 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 VAV3Q9UKW4 847 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 SQORQ9Y6N5 450 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 TARBP1Q13395 1621 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 GSC2O15499 205 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 S100A9P06702 114 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 CYP2C9P11712 490 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 SP100P23497 879 aaPredicted RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 MZF1P28698 734 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms