RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 KRT82Q9NSB4 513 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 ANAPC5Q9UJX4 755 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 SMG5Q9UPR3 1016 aaKnown RBP14.15□□□□□ -0.14
COPS7B-221ENST00000488111 NUMBLQ9Y6R0 609 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 SYN3O14994 580 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 GABBR2O75899 941 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 OAZ2O95190 189 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 CALB1P05937 261 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 LYNP07948 512 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 ATF2P15336 505 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 BCAT1P54687 386 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 ARPP19P56211 112 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 MAP3K7CLP57077 242 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 BST2Q10589 180 aaKnown RBP14.15□□□□□ -0.14
COPS7B-221ENST00000488111 MAMLD1Q13495 774 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 CTXN3Q4LDR2 81 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 FAM171BQ6P995 826 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 PRSS55Q6UWB4 352 aaPredicted RBP14.15□□□□□ -0.14
COPS7B-221ENST00000488111 PRUNE1Q86TP1 453 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 TDRPQ86YL5 185 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 ZNF558Q96NG5 402 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 HAPLN3Q96S86 360 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 KCNK16Q96T55 309 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 VN1R3Q9BXE9 311 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 OCEL1Q9H607 264 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 TMEM30AQ9NV96 361 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.15□□□□□ -0.14
COPS7B-221ENST00000488111 TTC36A6NLP5 189 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 SPOPO43791 374 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 FGFR3P22607 806 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 BDNFP23560 247 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 GCAP28676 217 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 RPL7AP62424 266 aaKnown RBP14.14□□□□□ -0.15
COPS7B-221ENST00000488111 TSPY1Q01534 308 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 SLC39A12Q504Y0 691 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 MTDHQ86UE4 582 aaKnown RBP14.14□□□□□ -0.15
COPS7B-221ENST00000488111 FAM35AQ86V20 835 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 XYLT1Q86Y38 959 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 HERVK_113Q902F9 699 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 PWWP2AQ96N64 755 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 PKMYT1Q99640 499 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 DUSP16Q9BY84 665 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 MIS12Q9H081 205 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 MMADHCQ9H3L0 296 aaPredicted RBP14.14□□□□□ -0.15
COPS7B-221ENST00000488111 AVENQ9NQS1 362 aaPredicted RBP14.14□□□□□ -0.15
COPS7B-221ENST00000488111 METTL5Q9NRN9 209 aaKnown RBP14.14□□□□□ -0.15
COPS7B-221ENST00000488111 ANAPC7Q9UJX3 599 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 TMCO1Q9UM00 188 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 TBC1D30Q9Y2I9 924 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 LCP1P13796 627 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 OR6B2Q6IFH4 312 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 PLEKHA7Q6IQ23 1121 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 PPP1R2P3Q6NXS1 205 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 DNAJC24Q6P3W2 148 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 RSPO2Q6UXX9 243 aaPredicted RBP14.14□□□□□ -0.15
COPS7B-221ENST00000488111 CLEC20AQ6ZU45 233 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 PIGZQ86VD9 579 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 SCUBE3Q8IX30 993 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 COLGALT1Q8NBJ5 622 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 SPATA18Q8TC71 538 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 GRK7Q8WTQ7 553 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 PIWIL1Q96J94 861 aaKnown RBP14.14□□□□□ -0.15
COPS7B-221ENST00000488111 PGLYRP2Q96PD5 576 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 TTPALQ9BTX7 342 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 TRABDQ9H4I3 376 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 CHST7Q9NS84 486 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 PARVAQ9NVD7 372 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 UVRAGQ9P2Y5 699 aa14.14□□□□□ -0.15
COPS7B-221ENST00000488111 COQ9O75208 318 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 FAM200BP0CF97 657 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 NPR3P17342 541 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 PLCB3Q01970 1234 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 ELAVL2Q12926 359 aaKnown RBP14.13□□□□□ -0.15
COPS7B-221ENST00000488111 LSAMPQ13449 338 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 DAB2IPQ5VWQ8 1189 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 LCA5Q86VQ0 697 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 HERC6Q8IVU3 1022 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 SLC39A11Q8N1S5 342 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 MCEEQ96PE7 176 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 SMOQ99835 787 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 ARL8BQ9NVJ2 186 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 SENP1Q9P0U3 644 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 NEU2Q9Y3R4 380 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 COMMD3-BMI1R4GMX3 469 aa14.13□□□□□ -0.15
COPS7B-221ENST00000488111 TCRBV5S1A1TA0A578 114 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 LCHNA4D1U4 455 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 GRAP2O75791 330 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 GAS8O95995 478 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 RPL17P18621 184 aaKnown RBP14.12□□□□□ -0.15
COPS7B-221ENST00000488111 HTRA4P83105 476 aaPredicted RBP14.12□□□□□ -0.15
COPS7B-221ENST00000488111 MRPL58Q14197 206 aaKnown RBP14.12□□□□□ -0.15
COPS7B-221ENST00000488111 MYBPC3Q14896 1274 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 SLC1A5Q15758 541 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 C9orf50Q5SZB4 431 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 HHATQ5VTY9 493 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 FYB2Q5VWT5 728 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 FAM183BPQ6ZVS7 135 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 FEZF2Q8TBJ5 459 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 CLEC4CQ8WTT0 213 aa14.12□□□□□ -0.15
COPS7B-221ENST00000488111 NDRG1Q92597 394 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms