RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 HSPA8P11142 646 aaKnown RBP6.4□□□□□ -1.39
VPS13D-209ENST00000487188 KRT3P12035 628 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 P4HA1P13674 534 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 PTPN1P18031 435 aaKnown RBP6.4□□□□□ -1.39
VPS13D-209ENST00000487188 TBXAS1P24557 533 aaPredicted RBP6.4□□□□□ -1.39
VPS13D-209ENST00000487188 GTF2IP78347 998 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 TSPY1Q01534 308 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 TCP10Q12799 353 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 PPM1LQ5SGD2 360 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 SCYL2Q6P3W7 929 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 CYP2R1Q6VVX0 501 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 TMEM26Q6ZUK4 368 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 DPH6Q7L8W6 267 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 DAW1Q8N136 415 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 LZTR1Q8N653 840 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 LRTOMTQ8WZ04 291 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 OLFM1Q99784 485 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 WDR83Q9BRX9 315 aaKnown RBP6.4□□□□□ -1.39
VPS13D-209ENST00000487188 CD209Q9NNX6 404 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 TBX20Q9UMR3 447 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 FIS1Q9Y3D6 152 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 TEX264Q9Y6I9 313 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 DOT1LQ8TEK3 1739 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CROCCQ5TZA2 2017 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 TESPA1A2RU30 521 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CCDC162PA2VCL2 907 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 APOC4-APOC2K7ER74 178 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 TRIM38O00635 465 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 TPST1O60507 370 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 MAP3K6O95382 1288 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 BMP10O95393 424 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 APOC2P02655 101 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CCNA2P20248 432 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CNTFP26441 200 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SERPINB1P30740 379 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 ALDH3B2P48448 385 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 MOGQ16653 247 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CYP2A13Q16696 494 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 NDUFA5Q16718 116 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 MGAT5BQ3V5L5 792 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 AARS2Q5JTZ9 985 aaKnown RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 FAM182AQ5T1J6 154 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 IL23RQ5VWK5 629 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 MBLAC2Q68D91 279 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 DNAJC14Q6Y2X3 702 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 FRA10AC1Q70Z53 315 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CHERPQ8IWX8 916 aaKnown RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 PGAM4Q8N0Y7 254 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 FIBCD1Q8N539 461 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CAPSLQ8WWF8 208 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 NSMCE3Q96MG7 304 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 TBC1D22BQ9NU19 505 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 DKK3Q9UBP4 350 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 GGA1Q9UJY5 639 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CDYLQ9Y232 598 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 DAGLAQ9Y4D2 1042 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 NUB1Q9Y5A7 615 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF536O15090 1300 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 LY75O60449 1722 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 PIK3R2O00459 728 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 PMM2O15305 246 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 PLIN3O60664 434 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 RNASEH2AO75792 299 aaKnown RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 ARP10275 920 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 ADRA2BP18089 450 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SAT1P21673 171 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 KDELR1P24390 212 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 TKTP29401 623 aaKnown RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 ETFBP38117 255 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 QARSP47897 775 aaKnown RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 IKBKEQ14164 716 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CCDC14Q49A88 953 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 LDLRAP1Q5SW96 308 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SEL1L3Q68CR1 1132 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 GPAT2Q6NUI2 795 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 DHRS4L2Q6PKH6 230 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 NPNTQ6UXI9 565 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SCARA5Q6ZMJ2 495 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 UNC5AQ6ZN44 842 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 IFNLR1Q8IU57 520 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 PCDH20Q8N6Y1 951 aaKnown RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 RP9Q8TA86 221 aaKnown RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CNDP1Q96KN2 507 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 MARK4Q96L34 752 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SLX1AQ9BQ83 275 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CDH19Q9H159 772 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SMYD2Q9NRG4 433 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SLC38A7Q9NVC3 462 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 MID2Q9UJV3 735 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 COQ4Q9Y3A0 265 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 PLIN4Q96Q06 1357 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 STX16-NPEPL1H3BU86 382 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CLOCKO15516 846 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 MAFGO15525 162 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 GDF11O95390 407 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 EIF2S1P05198 315 aaKnown RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 FGF3P11487 239 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 TFE3P19532 575 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SCNN1DP51172 638 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 BCAR1P56945 870 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms