RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 LMOD3Q0VAK6 560 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 GAB1Q13480 694 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 MAPRE1Q15691 268 aaKnown RBP5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 Q6ZPA2 131 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 MAATS1Q7Z4T9 603 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 ULK2Q8IYT8 1036 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 LINC01465Q8N7H1 131 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 TERB1Q8NA31 727 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 USP38Q8NB14 1042 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 PPHLN1Q8NEY8 458 aaKnown RBP5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 STAMQ92783 540 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 ADGRE3Q9BY15 652 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 GPR63Q9BZJ6 419 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 PDE11AQ9HCR9 933 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 BIVM-ERCC5R4GMW8 1640 aa5.54□□□□□ -1.52
PRPF38A-203ENST00000487160 CUL7Q14999 1698 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 CYP3A7-CYP3A51PA0A087WV96 503 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 GCOM1H8Y6P7 765 aaPredicted RBP5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 KLK10O43240 276 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 MT-CO3P00414 261 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 ACP5P13686 325 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 INSRRP14616 1297 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 CYP3A7P24462 503 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 NR1H2P55055 460 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 MFSD13AQ14CX5 517 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 FAM153CQ494X1 144 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 TSTD2Q5T7W7 516 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 SLC29A4Q7RTT9 530 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 ZNF804AQ7Z570 1209 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 BCDIN3DQ7Z5W3 292 aaKnown RBP5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 TBC1D5Q92609 795 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 SKA1Q96BD8 255 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 RRP36Q96EU6 259 aaKnown RBP5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 HS6ST2Q96MM7 605 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 ASIC5Q9NY37 505 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 TFCP2L1Q9NZI6 479 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 B3GNT3Q9Y2A9 372 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 TMEM98Q9Y2Y6 226 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 COPG1Q9Y678 874 aaKnown RBP5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 ARID1BQ8NFD5 2236 aaPredicted RBP5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 FHAD1B1AJZ9 1412 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 FNDC1Q4ZHG4 1894 aaPredicted RBP5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 ERICH3Q5RHP9 1530 aa5.53□□□□□ -1.52
PRPF38A-203ENST00000487160 SAC3D1A6NKF1 404 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 C3orf70A6NLC5 250 aaPredicted RBP5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 GRM8O00222 908 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 CLIC1O00299 241 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 MGST3O14880 152 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 TSPAN3O60637 253 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 MBD4O95243 580 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 CD4P01730 458 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 ALDOAP04075 364 aaKnown RBP5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 HNRNPA1P09651 372 aaKnown RBP eCLIP5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 ATF7P17544 494 aaPredicted RBP5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 KRT4P19013 534 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 ELF1P32519 619 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 PNPLA4P41247 253 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 STAT6P42226 847 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 WDR5P61964 334 aaKnown RBP5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 CNGA3Q16281 694 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 CBWD5Q5RIA9 395 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 RSRC2Q7L4I2 434 aaKnown RBP5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 ANKRD44Q8N8A2 993 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 NEU4Q8WWR8 484 aaPredicted RBP5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 SLC9A6Q92581 669 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 AKAP1Q92667 903 aaKnown RBP eCLIP5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 CLPBQ9H078 707 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 UNC45AQ9H3U1 944 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 ZHX3Q9H4I2 956 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 AFG3L2Q9Y4W6 797 aa5.52□□□□□ -1.53
PRPF38A-203ENST00000487160 KRTAP9-6A0A140TA67 174 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 PRYO14603 147 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 MATN3O15232 486 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 HNRNPCP07910 306 aaKnown RBP eCLIP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 SLC3A2P08195 630 aaKnown RBP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 IGFBP2P18065 325 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 SFPQP23246 707 aaKnown RBP eCLIP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 SLC8A1P32418 973 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 GEMIN4P57678 1058 aaKnown RBP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 WDR45BQ5MNZ6 344 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 SLC9C2Q5TAH2 1124 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 ANO7Q6IWH7 933 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 SLC39A5Q6ZMH5 540 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 GRASPQ7Z6J2 395 aaPredicted RBP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 LAS2Q8IYD9 372 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 PCYOX1LQ8NBM8 494 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 SRFBP1Q8NEF9 429 aaKnown RBP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 ST8SIA4Q92187 359 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 DAZAP1Q96EP5 407 aaKnown RBP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 CCDC17Q96LX7 622 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 BBC3Q96PG8 261 aaPredicted RBP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 PPP1R10Q96QC0 940 aaKnown RBP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 NPAS1Q99742 590 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 TOR3AQ9H497 397 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 ALG13Q9NP73 1137 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms