RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ACAP1Q15027 740 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 CDO1Q16878 200 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 EOGTQ5NDL2 527 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 PPP1R15BQ5SWA1 713 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 CCDC122Q5T0U0 273 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 RAP1GAP2Q684P5 730 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 NADSYN1Q6IA69 706 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 SDE2Q6IQ49 451 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 RFWD3Q6PCD5 774 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 WDR59Q6PJI9 974 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 SYT13Q7L8C5 426 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 PHTF2Q8N3S3 785 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.14■□□□□ 0.01
LIMS3-205ENST00000487150 JOSD2Q8TAC2 188 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 USP33Q8TEY7 942 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 FAM172AQ8WUF8 416 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 CENPIQ92674 756 aaPredicted RBP15.14■□□□□ 0.01
LIMS3-205ENST00000487150 NTAN1Q96AB6 310 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 PRICKLE1Q96MT3 831 aaPredicted RBP15.14■□□□□ 0.01
LIMS3-205ENST00000487150 RPRD1AQ96P16 312 aaPredicted RBP15.14■□□□□ 0.01
LIMS3-205ENST00000487150 PANX2Q96RD6 677 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 EIF3CQ99613 913 aaKnown RBP15.14■□□□□ 0.01
LIMS3-205ENST00000487150 RBM12Q9NTZ6 932 aaKnown RBP15.14■□□□□ 0.01
LIMS3-205ENST00000487150 PLK2Q9NYY3 685 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 STARD13Q9Y3M8 1113 aa15.14■□□□□ 0.01
LIMS3-205ENST00000487150 FAM170AA1A519 330 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 ZBTB24O43167 697 aaPredicted RBP15.13■□□□□ 0.01
LIMS3-205ENST00000487150 TSPAN3O60637 253 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 CLDN11O75508 207 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 RNF8O76064 485 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 LUC7L3O95232 432 aaKnown RBP15.13■□□□□ 0.01
LIMS3-205ENST00000487150 PLEKP08567 350 aaPredicted RBP15.13■□□□□ 0.01
LIMS3-205ENST00000487150 PSMA2P25787 234 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 HOXA6P31267 233 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 SLC6A4P31645 630 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 SLC6A11P48066 632 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 ADKP55263 362 aaKnown RBP15.13■□□□□ 0.01
LIMS3-205ENST00000487150 AUHQ13825 339 aaKnown RBP15.13■□□□□ 0.01
LIMS3-205ENST00000487150 ANGPT1Q15389 498 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 EFHC2Q5JST6 749 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 TRNP1Q6NT89 227 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 Q6ZS52 159 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 CHST9Q7L1S5 443 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 PHLDB2Q86SQ0 1253 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 FAM131BQ86XD5 332 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 CCDC170Q8IYT3 715 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 RPLP0P6Q8NHW5 317 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 FIBINQ8TAL6 211 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 PRMT1Q99873 361 aaKnown RBP15.13■□□□□ 0.01
LIMS3-205ENST00000487150 NHEJ1Q9H9Q4 299 aaPredicted RBP15.13■□□□□ 0.01
LIMS3-205ENST00000487150 FBRSL1Q9HCM7 1045 aaKnown RBP15.13■□□□□ 0.01
LIMS3-205ENST00000487150 DONSONQ9NYP3 566 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 UVRAGQ9P2Y5 699 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 SLC8A2Q9UPR5 921 aa15.13■□□□□ 0.01
LIMS3-205ENST00000487150 TMEM191CA6NGB0 347 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 H0Y626 953 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 K7EQS6 105 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 AP5Z1O43299 807 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 ADCY5O95622 1261 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 ATP5BP06576 529 aaKnown RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 H2AFZP0C0S5 128 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 PABPC1P11940 636 aaKnown RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 TFE3P19532 575 aaPredicted RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 COL9A1P20849 921 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 HTR7P34969 479 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 CYLC1P35663 651 aaPredicted RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 HDAC4P56524 1084 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 RPS24P62847 133 aaKnown RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 NRG1Q02297 640 aaPredicted RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 SCAPQ12770 1279 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 PIGHQ14442 188 aaPredicted RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 C15orf59Q2T9L4 293 aaPredicted RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 NAIF1Q69YI7 327 aaPredicted RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 H2AFVQ71UI9 128 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 CAMKK1Q8N5S9 505 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 ZNF513Q8N8E2 541 aaPredicted RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 KIAA1522Q9P206 1035 aaPredicted RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 XPO7Q9UIA9 1087 aaKnown RBP15.12■□□□□ 0.01
LIMS3-205ENST00000487150 GGA2Q9UJY4 613 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 MMP17Q9ULZ9 603 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 HS3ST4Q9Y661 456 aa15.12■□□□□ 0.01
LIMS3-205ENST00000487150 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.11■□□□□ 0.01
LIMS3-205ENST00000487150 CCDC163A0A0D9SF12 145 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 GOLGA6L7A0A1B0GV03 622 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 CCP110O43303 1012 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 ATMINO43313 823 aaPredicted RBP15.11■□□□□ 0.01
LIMS3-205ENST00000487150 ALDH1A2O94788 518 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 ASLP04424 464 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 CYP1A2P05177 515 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 CISD3P0C7P0 127 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 ADRA1BP35368 520 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 KIR2DL1P43626 348 aaPredicted RBP15.11■□□□□ 0.01
LIMS3-205ENST00000487150 DGKEP52429 567 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 ZNF135P52742 658 aaPredicted RBP15.11■□□□□ 0.01
LIMS3-205ENST00000487150 CDH4P55283 916 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 SEC13P55735 322 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 RPL7AP62424 266 aaKnown RBP15.11■□□□□ 0.01
LIMS3-205ENST00000487150 GFPT1Q06210 699 aaPredicted RBP15.11■□□□□ 0.01
LIMS3-205ENST00000487150 ZNF177Q13360 481 aaPredicted RBP15.11■□□□□ 0.01
LIMS3-205ENST00000487150 SPA17Q15506 151 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms