RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 HSPA12BQ96MM6 686 aa19.8■□□□□ 0.76
CLIP2-206ENST00000487091 PRICKLE1Q96MT3 831 aaPredicted RBP19.8■□□□□ 0.76
CLIP2-206ENST00000487091 NUCKS1Q9H1E3 243 aaKnown RBP19.8■□□□□ 0.76
CLIP2-206ENST00000487091 CD93Q9NPY3 652 aa19.8■□□□□ 0.76
CLIP2-206ENST00000487091 WSB2Q9NYS7 404 aaPredicted RBP19.8■□□□□ 0.76
CLIP2-206ENST00000487091 STIM2Q9P246 746 aa19.8■□□□□ 0.76
CLIP2-206ENST00000487091 TJP2Q9UDY2 1190 aa19.8■□□□□ 0.76
CLIP2-206ENST00000487091 SLC6A14Q9UN76 642 aa19.8■□□□□ 0.76
CLIP2-206ENST00000487091 ATXN2Q99700 1313 aaKnown RBP19.79■□□□□ 0.76
CLIP2-206ENST00000487091 ASCC3Q8N3C0 2202 aaKnown RBP19.79■□□□□ 0.76
CLIP2-206ENST00000487091 SERPINF2P08697 491 aa19.79■□□□□ 0.76
CLIP2-206ENST00000487091 POLR2EP19388 210 aaKnown RBP19.79■□□□□ 0.76
CLIP2-206ENST00000487091 CD70P32970 193 aa19.79■□□□□ 0.76
CLIP2-206ENST00000487091 KRT9P35527 623 aa19.79■□□□□ 0.76
CLIP2-206ENST00000487091 TPMTP51580 245 aa19.79■□□□□ 0.76
CLIP2-206ENST00000487091 RPS24P62847 133 aaKnown RBP19.79■□□□□ 0.76
CLIP2-206ENST00000487091 PTPRNQ16849 979 aa19.79■□□□□ 0.76
CLIP2-206ENST00000487091 ZC3H12AQ5D1E8 599 aaKnown RBP19.79■□□□□ 0.76
CLIP2-206ENST00000487091 SYCP2LQ5T4T6 812 aa19.79■□□□□ 0.76
CLIP2-206ENST00000487091 FAM71AQ8IYT1 594 aa19.79■□□□□ 0.76
CLIP2-206ENST00000487091 TTC17Q96AE7 1141 aa19.79■□□□□ 0.76
CLIP2-206ENST00000487091 BTN2A3PQ96KV6 586 aa19.79■□□□□ 0.76
CLIP2-206ENST00000487091 SLC2A13Q96QE2 648 aa19.79■□□□□ 0.76
CLIP2-206ENST00000487091 FBRSQ9HAH7 460 aa19.79■□□□□ 0.76
CLIP2-206ENST00000487091 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.79■□□□□ 0.767e-7■■■■□ 25.5
CLIP2-206ENST00000487091 TPRP12270 2363 aaKnown RBP19.78■□□□□ 0.76
CLIP2-206ENST00000487091 KCNJ18B7U540 433 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 HSF2BPO75031 334 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 KCNK5O95279 499 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 MOCS2O96007 188 aaPredicted RBP19.78■□□□□ 0.76
CLIP2-206ENST00000487091 SLC2A3P11169 496 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 ACADMP11310 421 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 HLA-EP13747 358 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 ENGP17813 658 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 CDK17Q00537 523 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 KCNMA1Q12791 1236 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 KCNJ12Q14500 433 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 TAF5Q15542 800 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 HSP90AA4PQ58FG1 418 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 DCAF6Q58WW2 860 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 C11orf57Q6ZUT1 292 aaPredicted RBP19.78■□□□□ 0.76
CLIP2-206ENST00000487091 SLC47A2Q86VL8 602 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 PASD1Q8IV76 773 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 CCDC117Q8IWD4 279 aaPredicted RBP19.78■□□□□ 0.76
CLIP2-206ENST00000487091 ATP6V0D2Q8N8Y2 350 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 CADM4Q8NFZ8 388 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 MYEOVQ96EZ4 313 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 TOE1Q96GM8 510 aaKnown RBP19.78■□□□□ 0.76
CLIP2-206ENST00000487091 NUP58Q9BVL2 599 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 CAPN10Q9HC96 672 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 SAMSN1Q9NSI8 373 aaKnown RBP19.78■□□□□ 0.76
CLIP2-206ENST00000487091 SUN2Q9UH99 717 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 SLC12A6Q9UHW9 1150 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 XPO7Q9UIA9 1087 aaKnown RBP19.78■□□□□ 0.76
CLIP2-206ENST00000487091 NFE2L3Q9Y4A8 694 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 CEP83Q9Y592 693 aa19.78■□□□□ 0.76
CLIP2-206ENST00000487091 MUC22E2RYF6 1773 aaPredicted RBP19.78■□□□□ 0.76
CLIP2-206ENST00000487091 CFIP05156 583 aa19.77■□□□□ 0.76
CLIP2-206ENST00000487091 KCNA4P22459 653 aa19.77■□□□□ 0.76
CLIP2-206ENST00000487091 EEF1GP26641 437 aaKnown RBP19.77■□□□□ 0.76
CLIP2-206ENST00000487091 PITX1P78337 314 aaPredicted RBP19.77■□□□□ 0.76
CLIP2-206ENST00000487091 GFPT1Q06210 699 aaPredicted RBP19.77■□□□□ 0.76
CLIP2-206ENST00000487091 TCP11X2Q5H9J9 407 aa19.77■□□□□ 0.76
CLIP2-206ENST00000487091 WDR45BQ5MNZ6 344 aa19.77■□□□□ 0.76
CLIP2-206ENST00000487091 N4BP2L1Q5TBK1 243 aaPredicted RBP19.77■□□□□ 0.76
CLIP2-206ENST00000487091 KLHDC7AQ5VTJ3 777 aa19.77■□□□□ 0.76
CLIP2-206ENST00000487091 DEFB106AQ8N104 65 aa19.77■□□□□ 0.76
CLIP2-206ENST00000487091 C1orf131Q8NDD1 294 aaKnown RBP19.77■□□□□ 0.76
CLIP2-206ENST00000487091 ENOX1Q8TC92 643 aaKnown RBP19.77■□□□□ 0.76
CLIP2-206ENST00000487091 SUSD2Q9UGT4 822 aa19.77■□□□□ 0.76
CLIP2-206ENST00000487091 CACNA1EQ15878 2313 aa19.77■□□□□ 0.76
CLIP2-206ENST00000487091 KCNU1A8MYU2 1149 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 LUC7L3O95232 432 aaKnown RBP19.76■□□□□ 0.75
CLIP2-206ENST00000487091 ASLP04424 464 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 CSRP1P21291 193 aaKnown RBP19.76■□□□□ 0.75
CLIP2-206ENST00000487091 TACR2P21452 398 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 MTA1Q13330 715 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 CDH18Q13634 790 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 DRAP1Q14919 205 aaPredicted RBP19.76■□□□□ 0.75
CLIP2-206ENST00000487091 RAP1GAP2Q684P5 730 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 OR6B2Q6IFH4 312 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 OLFML1Q6UWY5 402 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 SLC26A9Q7LBE3 791 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 CHSY1Q86X52 802 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 ZDHHC17Q8IUH5 632 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 RGL4Q8IZJ4 473 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 LGI2Q8N0V4 545 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 CFAP52Q8N1V2 620 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 CARNMT1Q8N4J0 409 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 KDM1BQ8NB78 822 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 ZNF397Q8NF99 534 aaPredicted RBP19.76■□□□□ 0.75
CLIP2-206ENST00000487091 DNASE2BQ8WZ79 361 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 GPR174Q9BXC1 333 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 FAM204AQ9H8W3 233 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 PRSS16Q9NQE7 514 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 KIAA1522Q9P206 1035 aaPredicted RBP19.76■□□□□ 0.75
CLIP2-206ENST00000487091 INTS6Q9UL03 887 aaKnown RBP19.76■□□□□ 0.75
CLIP2-206ENST00000487091 FHOD1Q9Y613 1164 aa19.76■□□□□ 0.75
CLIP2-206ENST00000487091 PES1O00541 588 aaKnown RBP19.75■□□□□ 0.75
CLIP2-206ENST00000487091 PNMA6AP0CW24 399 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms