RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 RLN3Q8WXF3 142 aa23.19■■□□□ 1.3
CDHR3-212ENST00000487084 RRN3Q9NYV6 651 aa23.19■■□□□ 1.3
CDHR3-212ENST00000487084 NPC1O15118 1278 aa23.18■■□□□ 1.3
CDHR3-212ENST00000487084 GABRG2P18507 467 aa23.18■■□□□ 1.3
CDHR3-212ENST00000487084 TFE3P19532 575 aaPredicted RBP23.18■■□□□ 1.3
CDHR3-212ENST00000487084 CD70P32970 193 aa23.18■■□□□ 1.3
CDHR3-212ENST00000487084 ZNF234Q14588 700 aa23.18■■□□□ 1.3
CDHR3-212ENST00000487084 E2F5Q15329 346 aa23.18■■□□□ 1.3
CDHR3-212ENST00000487084 PLK5Q496M5 336 aa23.18■■□□□ 1.3
CDHR3-212ENST00000487084 ZNF557Q8N988 423 aaPredicted RBP23.18■■□□□ 1.3
CDHR3-212ENST00000487084 CYB5D2Q8WUJ1 264 aa23.18■■□□□ 1.3
CDHR3-212ENST00000487084 SPACA7Q96KW9 195 aa23.18■■□□□ 1.3
CDHR3-212ENST00000487084 NAP1L5Q96NT1 182 aaPredicted RBP23.18■■□□□ 1.3
CDHR3-212ENST00000487084 PCDHB18PQ96TA0 734 aa23.18■■□□□ 1.3
CDHR3-212ENST00000487084 METTL5Q9NRN9 209 aaKnown RBP23.18■■□□□ 1.3
CDHR3-212ENST00000487084 A0A1B0GTH6 734 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 H0Y626 953 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 GOLGA6L19H0YKK7 550 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 TIMM44O43615 452 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 CCDC172P0C7W6 258 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 FERP16591 822 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 FLT3P36888 993 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 NSFP46459 744 aaKnown RBP23.17■■□□□ 1.3
CDHR3-212ENST00000487084 DEUP1Q05D60 604 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 FNDC3BQ53EP0 1204 aaKnown RBP23.17■■□□□ 1.3
CDHR3-212ENST00000487084 OTUD1Q5VV17 481 aaPredicted RBP23.17■■□□□ 1.3
CDHR3-212ENST00000487084 SERPINA13PQ6UXR4 307 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 SND1Q7KZF4 910 aaKnown RBP eCLIP23.17■■□□□ 1.3
CDHR3-212ENST00000487084 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.17■■□□□ 1.3
CDHR3-212ENST00000487084 TBCBQ99426 244 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 NPY6RQ99463 290 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 DUSP15Q9H1R2 295 aaPredicted RBP23.17■■□□□ 1.3
CDHR3-212ENST00000487084 PIGVQ9NUD9 493 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 CALCOCO1Q9P1Z2 691 aa23.17■■□□□ 1.3
CDHR3-212ENST00000487084 EML5Q05BV3 1969 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 SDK1Q7Z5N4 2213 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 SYNCRIPO60506 623 aaKnown RBP23.16■■□□□ 1.3
CDHR3-212ENST00000487084 RHOBTB1O94844 696 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 NDUFV2P19404 249 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 BCKDHBP21953 392 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 MMP8P22894 467 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 GGCXP38435 758 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 LMAN2Q12907 356 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 CLEC16AQ2KHT3 1053 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 MBLAC2Q68D91 279 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 RNF43Q68DV7 783 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 ADIPOR2Q86V24 386 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 C11orf74Q86VG3 221 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 CIR1Q86X95 450 aaPredicted RBP23.16■■□□□ 1.3
CDHR3-212ENST00000487084 OLIG1Q8TAK6 271 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 FIBINQ8TAL6 211 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 AGPAT1Q99943 283 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 ADAM33Q9BZ11 813 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 SLC6A17Q9H1V8 727 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 PARD6AQ9NPB6 346 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 PLA2G4CQ9UP65 541 aa23.16■■□□□ 1.3
CDHR3-212ENST00000487084 A0A1W2PQC6 194 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 MAP3K13O43283 966 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 LUC7L3O95232 432 aaKnown RBP23.15■■□□□ 1.3
CDHR3-212ENST00000487084 EPHX1P07099 455 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 UNGP13051 313 aaPredicted RBP23.15■■□□□ 1.3
CDHR3-212ENST00000487084 POLR2EP19388 210 aaKnown RBP23.15■■□□□ 1.3
CDHR3-212ENST00000487084 PRKCHP24723 683 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 P2RY2P41231 377 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 BYSLQ13895 437 aaKnown RBP23.15■■□□□ 1.3
CDHR3-212ENST00000487084 SLC25A52Q3SY17 297 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 FUT11Q495W5 492 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 RABGAP1LQ5R372 815 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 KIAA1324Q6UXG2 1013 aaKnown RBP23.15■■□□□ 1.3
CDHR3-212ENST00000487084 GPR161Q8N6U8 529 aaKnown RBP23.15■■□□□ 1.3
CDHR3-212ENST00000487084 EMC1Q8N766 993 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 LOXL4Q96JB6 756 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 ZC3H10Q96K80 434 aaKnown RBP23.15■■□□□ 1.3
CDHR3-212ENST00000487084 CFAP57Q96MR6 1250 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 RPRD1AQ96P16 312 aaPredicted RBP23.15■■□□□ 1.3
CDHR3-212ENST00000487084 PRMT1Q99873 361 aaKnown RBP23.15■■□□□ 1.3
CDHR3-212ENST00000487084 TKTL2Q9H0I9 626 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 ARRDC1-AS1Q9H2J1 176 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 WDCPQ9H6R7 721 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 CD248Q9HCU0 757 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 ADAM22Q9P0K1 906 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 TMEM59LQ9UK28 342 aa23.15■■□□□ 1.3
CDHR3-212ENST00000487084 LRRC53A6NM62 1247 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 PAGE1O75459 146 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 EPN2O95208 641 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 CAVIN2O95810 425 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 F9P00740 461 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 ATP5BP06576 529 aaKnown RBP23.14■■□□□ 1.29
CDHR3-212ENST00000487084 HLA-EP13747 358 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 FANCCQ00597 558 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 CENPCQ03188 943 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 MTA1Q13330 715 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 CCDC6Q16204 474 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 TRNP1Q6NT89 227 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 KIAA0907Q7Z7F0 614 aaPredicted RBP23.14■■□□□ 1.29
CDHR3-212ENST00000487084 FRMD1Q8N878 549 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 BAP1Q92560 729 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 SIK2Q9H0K1 926 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 VANGL2Q9ULK5 521 aa23.14■■□□□ 1.29
CDHR3-212ENST00000487084 HS3ST4Q9Y661 456 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms