RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 HESX1Q9UBX0 185 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 TRIP11Q15643 1979 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 A6NJR5 290 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 PDLIM1O00151 329 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 TXNDC9O14530 226 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 ADCY6O43306 1168 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 ZBTB14O43829 449 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 ZMPSTE24O75844 475 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 IQCF3P0C7M6 154 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 CPA3P15088 417 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 VAV1P15498 845 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 DPEP1P16444 411 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 PGAM1P18669 254 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 TFE3P19532 575 aaPredicted RBP12.53□□□□□ -0.4
COL3A1-206ENST00000487010 MX2P20592 715 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 EDNRBP24530 442 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 MGAT1P26572 445 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 ITGA9Q13797 1035 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 SCUBE3Q8IX30 993 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 B4GALNT2Q8NHY0 566 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 ARNTL2Q8WYA1 636 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 WRNIP1Q96S55 665 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 SLC4A5Q9BY07 1137 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 MAGEB5Q9BZ81 275 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 DHX35Q9H5Z1 703 aaKnown RBP12.53□□□□□ -0.4
COL3A1-206ENST00000487010 HACL1Q9UJ83 578 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 INPP5FQ9Y2H2 1132 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 PCDHB12Q9Y5F1 795 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 NR2E3Q9Y5X4 410 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 PTPRFP10586 1907 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 A0A0A0MRY4 1105 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 F5H423 210 aaPredicted RBP12.53□□□□□ -0.4
COL3A1-206ENST00000487010 DENRO43583 198 aaKnown RBP12.53□□□□□ -0.4
COL3A1-206ENST00000487010 DGKIO75912 1065 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 TGFB3P10600 412 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 TYK2P29597 1187 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 ALDH1A3P47895 512 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 SESN2P58004 480 aaPredicted RBP12.53□□□□□ -0.4
COL3A1-206ENST00000487010 KLF10Q13118 480 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 SNAPC2Q13487 334 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 GRAMD1BQ3KR37 738 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 PKDCCQ504Y2 493 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 PPP1R26Q5T8A7 1209 aaPredicted RBP12.53□□□□□ -0.4
COL3A1-206ENST00000487010 EPGNQ6UW88 154 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 TMEM110Q86TL2 294 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 SPATA24Q86W54 205 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 AFG1LQ8WV93 481 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 TRAPPC12Q8WVT3 735 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 HTR3CQ8WXA8 447 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 SPATA13Q96N96 652 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 GCNAQ96QF7 691 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 CDH19Q9H159 772 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 RNPEPQ9H4A4 650 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 ASB7Q9H672 318 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 COG4Q9H9E3 785 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 PIH1D1Q9NWS0 290 aaKnown RBP12.53□□□□□ -0.4
COL3A1-206ENST00000487010 MTMR10Q9NXD2 777 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 DTLQ9NZJ0 730 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 C6orf203Q9P0P8 240 aaPredicted RBP12.53□□□□□ -0.4
COL3A1-206ENST00000487010 FZD1Q9UP38 647 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 DTNAQ9Y4J8 743 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 CDY2AQ9Y6F7 541 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 CDY1Q9Y6F8 540 aa12.53□□□□□ -0.4
COL3A1-206ENST00000487010 C15orf38-AP3S2A0A0A6YYH1 394 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 SOWAHBA6NEL2 793 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 CAPN8A6NHC0 703 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 PAPSS1O43252 624 aaPredicted RBP12.52□□□□□ -0.4
COL3A1-206ENST00000487010 ATP9BO43861 1147 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 LGR5O75473 907 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 GABBR2O75899 941 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 OR6B1O95007 311 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 SMIM18P0DKX4 95 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 GMPRP36959 345 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 TNFAIP2Q03169 654 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 USP4Q13107 963 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 TLR1Q15399 786 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 SLC10A6Q3KNW5 377 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 CCDC153Q494R4 210 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 NCBP2-AS2Q69YL0 99 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 POTEAQ6S8J7 498 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 TMC7Q7Z402 723 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 ARPINQ7Z6K5 226 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 TTC30AQ86WT1 665 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 PQLC1Q8N2U9 271 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 MARVELD2Q8N4S9 558 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 TTC39CQ8N584 583 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 COLGALT1Q8NBJ5 622 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 CSPG4P5Q96PW8 444 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 KCTD15Q96SI1 283 aaPredicted RBP12.52□□□□□ -0.4
COL3A1-206ENST00000487010 GPR20Q99678 358 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 FAM124BQ9H5Z6 455 aaPredicted RBP12.52□□□□□ -0.4
COL3A1-206ENST00000487010 EIF2B3Q9NR50 452 aaKnown RBP12.52□□□□□ -0.4
COL3A1-206ENST00000487010 ZNF358Q9NW07 568 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 GTF2IRD1Q9UHL9 959 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 PSMD13Q9UNM6 376 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 AP4E1Q9UPM8 1137 aa12.52□□□□□ -0.4
COL3A1-206ENST00000487010 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.52□□□□□ -0.41
COL3A1-206ENST00000487010 HACD1B0YJ81 288 aa12.52□□□□□ -0.41
COL3A1-206ENST00000487010 SPATA31D3P0C874 917 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms