RNA–Protein interactions for RNA: ENST00000486927.1

ATL2-215, Transcript of atlastin GTPase 2, human

TSL 4

Gene ATL2, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL2-215	ENST00000486927	GCN1	Q92616	2671 aa	Known RBP	13.3	□□□□□ -0.28
ATL2-215	ENST00000486927	EIF4E1B	A6NMX2	242 aa	Known RBP	13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	GABBR2	O75899	941 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	IGLV3-27	P01718	113 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	WNT1	P04628	370 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	CD70	P32970	193 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	EIF2S3	P41091	472 aa	Known RBP	13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	SGSH	P51688	502 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	C9orf64	Q5T6V5	341 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	ZNF776	Q68DI1	518 aa	Predicted RBP	13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	LSM14A	Q8ND56	463 aa	Known RBP	13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	FBXL13	Q8NEE6	735 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	RNF139	Q8WU17	664 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	TSC1	Q92574	1164 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	EDEM1	Q92611	657 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	UBL7	Q96S82	380 aa	Predicted RBP	13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	ACE2	Q9BYF1	805 aa	Predicted RBP	13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	PABPC3	Q9H361	631 aa	Known RBP	13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	MTG2	Q9H4K7	406 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	PRORY	Q9H606	182 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	FTSJ1	Q9UET6	329 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	KIAA1257	Q9ULG3	409 aa		13.29	□□□□□ -0.28
ATL2-215	ENST00000486927	ACACA	Q13085	2346 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	GOLGA6L7	A0A1B0GV03	622 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927		A0A1W2PR77	199 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	PLK4	O00444	970 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	WNT9A	O14904	365 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	IRAK2	O43187	625 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	LDOC1	O95751	146 aa	Predicted RBP	13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	F13A1	P00488	732 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	JUP	P14923	745 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	POLR2E	P19388	210 aa	Known RBP	13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	ITPKB	P27987	946 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	C21orf59	P57076	290 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	KCNJ12	Q14500	433 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	RTP5	Q14D33	572 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	TTC31	Q49AM3	519 aa	Predicted RBP	13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	PKDCC	Q504Y2	493 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	ZCWPW2	Q504Y3	356 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	FAM133B	Q5BKY9	247 aa	Known RBP	13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	CACTIN-AS1	Q8N1I8	211 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	GUF1	Q8N442	669 aa	Known RBP	13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	WFDC5	Q8TCV5	224 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	SKA1	Q96BD8	255 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	MRGPRX3	Q96LB0	322 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	FAM129B	Q96TA1	746 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	NRSN2	Q9GZP1	204 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	NEUROG2	Q9H2A3	272 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	LRRC4	Q9HBW1	653 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	FBXL12	Q9NXK8	326 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	ADAMTS1	Q9UHI8	967 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	TSPAN16	Q9UKR8	245 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	INTS6	Q9UL03	887 aa	Known RBP	13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	MAPK8IP1	Q9UQF2	711 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	COQ4	Q9Y3A0	265 aa		13.28	□□□□□ -0.28
ATL2-215	ENST00000486927	FAM237A	A0A1B0GTK4	181 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927		A0A1B0GVL5	298 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	ENC1	O14682	589 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	PFKFB1	P16118	471 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	SLC6A4	P31645	630 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	RXRG	P48443	463 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	CCR5	P51681	352 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	IL9R	Q01113	521 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	DNM1	Q05193	864 aa	Known RBP	13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	C19orf57	Q0VDD7	668 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	SFSWAP	Q12872	951 aa	Known RBP	13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	DPYD	Q12882	1025 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	INAVA	Q3KP66	663 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	CCDC157	Q569K6	752 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	MSANTD2	Q6P1R3	559 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	RFWD3	Q6PCD5	774 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	NCEH1	Q6PIU2	408 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	ADAT2	Q7Z6V5	191 aa	Known RBP	13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	GATAD2A	Q86YP4	633 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	UNC45B	Q8IWX7	931 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	ZNF557	Q8N988	423 aa	Predicted RBP	13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	UBA3	Q8TBC4	463 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	SLC35F5	Q8WV83	523 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	IPO9	Q96P70	1041 aa	Known RBP	13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	MMRN2	Q9H8L6	949 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	CNGB3	Q9NQW8	809 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	SERGEF	Q9UGK8	458 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	RAI2	Q9Y5P3	530 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	KNL1	Q8NG31	2342 aa		13.27	□□□□□ -0.29
ATL2-215	ENST00000486927	TARSL2	A2RTX5	802 aa	Known RBP	13.26	□□□□□ -0.29
ATL2-215	ENST00000486927	ATXN7	O15265	892 aa	Predicted RBP	13.26	□□□□□ -0.29
ATL2-215	ENST00000486927	MSI1	O43347	362 aa	Known RBP	13.26	□□□□□ -0.29
ATL2-215	ENST00000486927	TLX3	O43711	291 aa	Predicted RBP	13.26	□□□□□ -0.29
ATL2-215	ENST00000486927	ACSL4	O60488	711 aa		13.26	□□□□□ -0.29
ATL2-215	ENST00000486927	STX10	O60499	249 aa		13.26	□□□□□ -0.29
ATL2-215	ENST00000486927	TBL1X	O60907	577 aa		13.26	□□□□□ -0.29
ATL2-215	ENST00000486927	RNASEH1	O60930	286 aa	Known RBP	13.26	□□□□□ -0.29
ATL2-215	ENST00000486927	SIN3B	O75182	1162 aa		13.26	□□□□□ -0.29
ATL2-215	ENST00000486927	FLNB	O75369	2602 aa	Known RBP	13.26	□□□□□ -0.29

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