RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ATP6V0D2Q8N8Y2 350 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 HSPH1Q92598 858 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 AZIN2Q96A70 460 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 MYEOVQ96EZ4 313 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 HES6Q96HZ4 224 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 ALS2CR12Q96Q35 445 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 WDR24Q96S15 920 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 HAPLN3Q96S86 360 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 RPP25Q9BUL9 199 aaKnown RBP13.23□□□□□ -0.29
HDAC6-229ENST00000486665 SIK2Q9H0K1 926 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 OSBPL2Q9H1P3 480 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 LINC00597Q9H2U6 94 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 KLHL11Q9NVR0 708 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 TMEM51Q9NW97 253 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 SLC12A6Q9UHW9 1150 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 SH3BP1Q9Y3L3 701 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 PCDHA3Q9Y5H8 950 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 HS3ST4Q9Y661 456 aa13.23□□□□□ -0.29
HDAC6-229ENST00000486665 ZFP37Q9Y6Q3 630 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-229ENST00000486665 EP300Q09472 2414 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-229ENST00000486665 E2F8A0AVK6 867 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 FAM72CH0Y354 149 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 ENC1O14682 589 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 FANCGO15287 622 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 L1CAMP32004 1257 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 CTNNA1P35221 906 aaKnown RBP13.22□□□□□ -0.29
HDAC6-229ENST00000486665 DNA2P51530 1060 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 MLLT6P55198 1093 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-229ENST00000486665 SCAPQ12770 1279 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 ANGPT1Q15389 498 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 ARL13BQ3SXY8 428 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 FAM133BQ5BKY9 247 aaKnown RBP13.22□□□□□ -0.29
HDAC6-229ENST00000486665 MS4A13Q5J8X5 152 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 FAM72AQ5TYM5 149 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 FAM72DQ6L9T8 149 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 FAM72BQ86X60 149 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 DDX42Q86XP3 938 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC6-229ENST00000486665 BBS7Q8IWZ6 715 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 DTWD2Q8NBA8 298 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 TEKT4Q8WW24 435 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 RAPGEF5Q92565 580 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 ALG3Q92685 438 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 FGF14Q92915 247 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 BTN2A3PQ96KV6 586 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 KCTD15Q96SI1 283 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-229ENST00000486665 PRMT1Q99873 361 aaKnown RBP13.22□□□□□ -0.29
HDAC6-229ENST00000486665 KXD1Q9BQD3 176 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 TLR10Q9BXR5 811 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 DCLK3Q9C098 648 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 DHX35Q9H5Z1 703 aaKnown RBP13.22□□□□□ -0.29
HDAC6-229ENST00000486665 KIF9Q9HAQ2 790 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 ZFP14Q9HCL3 533 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 FBXL21Q9UKT6 434 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 CA14Q9ULX7 337 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 AP4E1Q9UPM8 1137 aa13.22□□□□□ -0.29
HDAC6-229ENST00000486665 CACNA1AO00555 2505 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 ANHXE9PGG2 379 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 TRDMT1O14717 391 aaKnown RBP13.21□□□□□ -0.29
HDAC6-229ENST00000486665 PSTPIP1O43586 416 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 ATP1A1P05023 1023 aaKnown RBP13.21□□□□□ -0.29
HDAC6-229ENST00000486665 KRT7P08729 469 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 CD48P09326 243 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 SLC6A4P31645 630 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 SLC11A2P49281 568 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 AIF1P55008 147 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 ETF1P62495 437 aaKnown RBP13.21□□□□□ -0.29
HDAC6-229ENST00000486665 AUHQ13825 339 aaKnown RBP13.21□□□□□ -0.29
HDAC6-229ENST00000486665 RPS6KA1Q15418 735 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 EFHC2Q5JST6 749 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 RAP1GAP2Q684P5 730 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 RFWD3Q6PCD5 774 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 VITQ6UXI7 678 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 POLNQ7Z5Q5 900 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 ANKS1BQ7Z6G8 1248 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 PSTKQ8IV42 348 aaKnown RBP13.21□□□□□ -0.29
HDAC6-229ENST00000486665 ZNF683Q8IZ20 524 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 BPIFB1Q8TDL5 484 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 NKD2Q969F2 451 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-229ENST00000486665 ELSPBP1Q96BH3 223 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 P2RY11Q96G91 374 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 C1orf74Q96LT6 269 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 PCDH18Q9HCL0 1135 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.21□□□□□ -0.29
HDAC6-229ENST00000486665 OBP2AQ9NY56 170 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 STOML2Q9UJZ1 356 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 LSM7Q9UK45 103 aaKnown RBP13.21□□□□□ -0.29
HDAC6-229ENST00000486665 JRKLQ9Y4A0 524 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 WNT6Q9Y6F9 365 aa13.21□□□□□ -0.29
HDAC6-229ENST00000486665 CCDC66A2RUB6 948 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 C3orf70A6NLC5 250 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-229ENST00000486665 MIF4GDA9UHW6 222 aaKnown RBP13.2□□□□□ -0.3
HDAC6-229ENST00000486665 GFRA2O00451 464 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 TSPAN3O60637 253 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 SRGAP2O75044 1071 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 ECI2O75521 394 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 LATS1O95835 1130 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 TACR2P21452 398 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 KDELR1P24390 212 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 IL4RP24394 825 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 MSNP26038 577 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms