RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 PPP6R2O75170 966 aa4.51□□□□□ -1.69
GCFC2-209ENST00000486016 MYL4P12829 197 aa4.51□□□□□ -1.69
GCFC2-209ENST00000486016 CASP5P51878 434 aa4.51□□□□□ -1.69
GCFC2-209ENST00000486016 LTBQ06643 244 aa4.51□□□□□ -1.69
GCFC2-209ENST00000486016 ASIC2Q16515 512 aa4.51□□□□□ -1.69
GCFC2-209ENST00000486016 SPATA2LQ8IUW3 424 aaPredicted RBP4.51□□□□□ -1.69
GCFC2-209ENST00000486016 TIFAQ96CG3 184 aa4.51□□□□□ -1.69
GCFC2-209ENST00000486016 CLMNQ96JQ2 1002 aa4.51□□□□□ -1.69
GCFC2-209ENST00000486016 NTPCRQ9BSD7 190 aaKnown RBP4.51□□□□□ -1.69
GCFC2-209ENST00000486016 MAGEB5Q9BZ81 275 aa4.51□□□□□ -1.69
GCFC2-209ENST00000486016 RBM38Q9H0Z9 239 aaKnown RBP4.51□□□□□ -1.69
GCFC2-209ENST00000486016 PCDHAC1Q9H158 963 aa4.51□□□□□ -1.69
GCFC2-209ENST00000486016 KCNK9Q9NPC2 374 aa4.51□□□□□ -1.69
GCFC2-209ENST00000486016 PRDM11Q9NQV5 511 aa4.51□□□□□ -1.69
GCFC2-209ENST00000486016 H0YGN5 161 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 KRT86O43790 486 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 TGFB3P10600 412 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 PECAM1P16284 738 aaPredicted RBP4.5□□□□□ -1.69
GCFC2-209ENST00000486016 EGR1P18146 543 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 CDC25AP30304 524 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 GSTM5P46439 218 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 RFX2P48378 723 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 HYAL1Q12794 435 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 KEAP1Q14145 624 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 KRT81Q14533 505 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 PPP4R4Q6NUP7 873 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 MSANTD2Q6P1R3 559 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 PDXDC1Q6P996 788 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 GPSM1Q86YR5 675 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 FBXL14Q8N1E6 418 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 PAQR4Q8N4S7 273 aaPredicted RBP4.5□□□□□ -1.69
GCFC2-209ENST00000486016 FAM47BQ8NA70 645 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 NPIPB3Q92617 1050 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 NEUROG1Q92886 237 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 PAAF1Q9BRP4 392 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 TRIM2Q9C040 744 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 MAP6D1Q9H9H5 199 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 FSCN3Q9NQT6 498 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 TCEAL9Q9UHQ7 104 aa4.5□□□□□ -1.69
GCFC2-209ENST00000486016 IPO11Q9UI26 975 aaKnown RBP4.5□□□□□ -1.69
GCFC2-209ENST00000486016 POM121BA6NF01 834 aa4.49□□□□□ -1.69
GCFC2-209ENST00000486016 MDM4O15151 490 aa4.49□□□□□ -1.69
GCFC2-209ENST00000486016 ARHGAP15Q53QZ3 475 aa4.49□□□□□ -1.69
GCFC2-209ENST00000486016 TRILQ7L0X0 811 aa4.49□□□□□ -1.69
GCFC2-209ENST00000486016 NUDCD2Q8WVJ2 157 aa4.49□□□□□ -1.69
GCFC2-209ENST00000486016 LPAR1Q92633 364 aa4.49□□□□□ -1.69
GCFC2-209ENST00000486016 URB1-AS1Q96HZ7 61 aa4.49□□□□□ -1.69
GCFC2-209ENST00000486016 SNX27Q96L92 541 aa4.49□□□□□ -1.69
GCFC2-209ENST00000486016 HTATIP2Q9BUP3 242 aa4.49□□□□□ -1.69
GCFC2-209ENST00000486016 SIRT3Q9NTG7 399 aaPredicted RBP4.49□□□□□ -1.69
GCFC2-209ENST00000486016 PODXLO00592 558 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 NPC1O15118 1278 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 KPNA5O15131 536 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 CNTN5O94779 1100 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 NDST3O95803 873 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 VIPP01282 170 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 SLC5A1P13866 664 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 MLH1P40692 756 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 EGR4Q05215 589 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 SLC4A8Q2Y0W8 1093 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 BEND5Q7L4P6 421 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 GLIS1Q8NBF1 620 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 CENPIQ92674 756 aaPredicted RBP4.48□□□□□ -1.69
GCFC2-209ENST00000486016 KAT2AQ92830 837 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 CD93Q9NPY3 652 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 CKAP5Q14008 2032 aa4.48□□□□□ -1.69
GCFC2-209ENST00000486016 RPS10-NUDT3A0A1W2PQS6 291 aa4.47□□□□□ -1.69
GCFC2-209ENST00000486016 RHODO00212 210 aa4.47□□□□□ -1.69
GCFC2-209ENST00000486016 TAF5LO75529 589 aa4.47□□□□□ -1.69
GCFC2-209ENST00000486016 FGF3P11487 239 aaPredicted RBP4.47□□□□□ -1.69
GCFC2-209ENST00000486016 IGFBP2P18065 325 aa4.47□□□□□ -1.69
GCFC2-209ENST00000486016 SLC37A1P57057 533 aa4.47□□□□□ -1.69
GCFC2-209ENST00000486016 CAPRIN2Q6IMN6 1127 aaKnown RBP4.47□□□□□ -1.69
GCFC2-209ENST00000486016 LRIG3Q6UXM1 1119 aa4.47□□□□□ -1.69
GCFC2-209ENST00000486016 ADGRF3Q8IZF5 1079 aa4.47□□□□□ -1.69
GCFC2-209ENST00000486016 TASP1Q9H6P5 420 aa4.47□□□□□ -1.69
GCFC2-209ENST00000486016 TXNRD2Q9NNW7 524 aa4.47□□□□□ -1.69
GCFC2-209ENST00000486016 RGL1Q9NZL6 768 aa4.47□□□□□ -1.69
GCFC2-209ENST00000486016 G3BP2Q9UN86 482 aaKnown RBP4.47□□□□□ -1.69
GCFC2-209ENST00000486016 IFITM10A6NMD0 228 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 FOXO6A8MYZ6 492 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 PQBP1O60828 265 aaKnown RBP4.46□□□□□ -1.7
GCFC2-209ENST00000486016 ITGA5P08648 1049 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 TGM2P21980 687 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 PRIM2P49643 509 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 RASSF2P50749 326 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 GAD2Q05329 585 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 Q0VFX4 171 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 MAPKAPK3Q16644 382 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 INO80DQ53TQ3 878 aaPredicted RBP4.46□□□□□ -1.7
GCFC2-209ENST00000486016 ZNF628Q5EBL2 1059 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 Q5PR19 223 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 WASHC2DQ5SRD0 308 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 TTC39AQ5SRH9 613 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 CCDC150Q8NCX0 1101 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 ELP5Q8TE02 316 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 PMM1Q92871 262 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 ATP2A3Q93084 1043 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 GRAMD1AQ96CP6 724 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 MED30Q96HR3 178 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms