RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 SMG7Q92540 1137 aaKnown RBP11.71□□□□□ -0.53
SND1-212ENST00000485871 MRPS31Q92665 395 aaKnown RBP11.71□□□□□ -0.53
SND1-212ENST00000485871 CSPG4P5Q96PW8 444 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 RNF157Q96PX1 679 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 CYP2S1Q96SQ9 504 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 PNKPQ96T60 521 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 SLC46A2Q9BY10 475 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 FUT8Q9BYC5 575 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 ATXN3LQ9H3M9 355 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 CLEC1BQ9P126 229 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 SNX10Q9Y5X0 201 aa11.71□□□□□ -0.53
SND1-212ENST00000485871 MUC6Q6W4X9 2439 aa11.71□□□□□ -0.54
SND1-212ENST00000485871 NUP205Q92621 2012 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 NYNRINQ9P2P1 1898 aaKnown RBP11.7□□□□□ -0.54
SND1-212ENST00000485871 TBX10O75333 385 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 LRIG2O94898 1065 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 SLC2A3P11169 496 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 MBL2P11226 248 aaPredicted RBP11.7□□□□□ -0.54
SND1-212ENST00000485871 GOT1P17174 413 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 CEBPBP17676 345 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 HDCP19113 662 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 DDX6P26196 483 aaKnown RBP eCLIP11.7□□□□□ -0.54
SND1-212ENST00000485871 LTBRP36941 435 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 HCAR3P49019 387 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 MLLT6P55198 1093 aaPredicted RBP11.7□□□□□ -0.54
SND1-212ENST00000485871 VSNL1P62760 191 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 COG7P83436 770 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 ARL13BQ3SXY8 428 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 ANKRD20A8PQ5CZ79 823 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 MS4A13Q5J8X5 152 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 SLC9A4Q6AI14 798 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 NADSYN1Q6IA69 706 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 TMC5Q6UXY8 1006 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 CCDC50Q8IVM0 306 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 PLD5Q8N7P1 536 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 MAB21L3Q8N8X9 362 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 PRELID2Q8N945 189 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 HLA-CQ95604 372 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 AZIN2Q96A70 460 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 PLD4Q96BZ4 506 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 PKNOX2Q96KN3 472 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 C1orf74Q96LT6 269 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 GCNAQ96QF7 691 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 PRMT1Q99873 361 aaKnown RBP11.7□□□□□ -0.54
SND1-212ENST00000485871 S1PR5Q9H228 398 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 IGFLR1Q9H665 355 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 TASP1Q9H6P5 420 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 TRPC7Q9HCX4 862 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 C11orf16Q9NQ32 467 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 GKN1Q9NS71 199 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 HS3ST4Q9Y661 456 aa11.7□□□□□ -0.54
SND1-212ENST00000485871 CLUHO75153 1309 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 IGLV3-10A0A075B6K4 115 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 TRAV19A0A0A6YYK7 116 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 GFRA2O00451 464 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 ZNF197O14709 1029 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 DCLK1O15075 740 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 APOEP02649 317 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 HMBSP08397 361 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 TCF3P15923 654 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 GGCXP38435 758 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 ZNF135P52742 658 aaPredicted RBP11.69□□□□□ -0.54
SND1-212ENST00000485871 DLX2Q07687 328 aaPredicted RBP11.69□□□□□ -0.54
SND1-212ENST00000485871 C2orf54Q08AI8 447 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 KRT81Q14533 505 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 C5orf22Q49AR2 442 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 FAM133BQ5BKY9 247 aaKnown RBP11.69□□□□□ -0.54
SND1-212ENST00000485871 PPP6R3Q5H9R7 873 aaPredicted RBP11.69□□□□□ -0.54
SND1-212ENST00000485871 RARS2Q5T160 578 aaKnown RBP11.69□□□□□ -0.54
SND1-212ENST00000485871 ZFYVE27Q5T4F4 411 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 GPR158Q5T848 1215 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 KAZNQ674X7 775 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 NUGGCQ68CJ6 796 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 Q6ZNB5 142 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 C14orf80Q86SX3 495 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 MAP7D3Q8IWC1 876 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 FAM217AQ8IXS0 508 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 IFT20Q8IY31 132 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 ATP6V0D2Q8N8Y2 350 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 C12orf50Q8NA57 414 aaPredicted RBP11.69□□□□□ -0.54
SND1-212ENST00000485871 RIN3Q8TB24 985 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 ITFG1Q8TB96 612 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 MYEOVQ96EZ4 313 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 BTN2A3PQ96KV6 586 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 HEMGNQ9BXL5 484 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 AP1M1Q9BXS5 423 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 CALN1Q9BXU9 219 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 ARHGEF4Q9NR80 690 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 RBM12Q9NTZ6 932 aaKnown RBP11.69□□□□□ -0.54
SND1-212ENST00000485871 STIM2Q9P246 746 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 OR12D3Q9UGF7 316 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 CDH22Q9UJ99 828 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 STOML2Q9UJZ1 356 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 ARHGAP26Q9UNA1 814 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 R3HDM2Q9Y2K5 976 aaKnown RBP11.69□□□□□ -0.54
SND1-212ENST00000485871 CPQQ9Y646 472 aa11.69□□□□□ -0.54
SND1-212ENST00000485871 PRR33A8MZF0 331 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 H3BRJ5 948 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 ACSL4O60488 711 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 CST8O60676 142 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms