RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 OLFML1Q6UWY5 402 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 SLC26A9Q7LBE3 791 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 ASCL5Q7RTU5 278 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 IRF2BP2Q7Z5L9 587 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 TAC4Q86UU9 113 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 ZNF677Q86XU0 584 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 TMEM25Q86YD3 366 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 CPNE8Q86YQ8 564 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 YAF2Q8IY57 180 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 CPA6Q8N4T0 437 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 SUMF1Q8NBK3 374 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 C1orf131Q8NDD1 294 aaKnown RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 EDEM1Q92611 657 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 PLD4Q96BZ4 506 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 PGAP3Q96FM1 320 aaPredicted RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 FCRL2Q96LA5 508 aaPredicted RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 SLC2A13Q96QE2 648 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 LSM14BQ9BX40 385 aaKnown RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 MAGEB5Q9BZ81 275 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 VPS16Q9H269 839 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 MFSD1Q9H3U5 465 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 LMAN1LQ9HAT1 526 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 CBX8Q9HC52 389 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 POLMQ9NP87 494 aaPredicted RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 SPHK2Q9NRA0 654 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 OLA1Q9NTK5 396 aaKnown RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 CFAP97Q9P2B7 532 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 SFMBT1Q9UHJ3 866 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 MYO6Q9UM54 1294 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 NENFQ9UMX5 172 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 ZNF510Q9Y2H8 683 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 SLC27A6Q9Y2P4 619 aa5.97□□□□□ -1.45
CUX1-208ENST00000485792 HBS1LQ9Y450 684 aaKnown RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 ZFC3H1O60293 1989 aaKnown RBP5.97□□□□□ -1.45
CUX1-208ENST00000485792 TTLL8A6PVC2 850 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 KCNU1A8MYU2 1149 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 PRRT4C9JH25 899 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 MED7O43513 233 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 MAN1A2O60476 641 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 ADAM23O75077 832 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 ENDOD1O94919 500 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 LSM8O95777 96 aaKnown RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 LTFP02788 710 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 MMEP08473 750 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 RALAP11233 206 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 UNGP13051 313 aaPredicted RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 TNFRSF4P43489 277 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 IFNAR2P48551 515 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 ZNF165P49910 485 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 KPNA1P52294 538 aaPredicted RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 EPHA4P54764 986 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 YWHAZP63104 245 aaKnown RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 NOMO3P69849 1222 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 ZNF252P-AS1Q0IIN9 211 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 UBXN2BQ14CS0 331 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 TLR1Q15399 786 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 SYCP1Q15431 976 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 TPD52L1Q16890 204 aaPredicted RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 ARHGAP44Q17R89 818 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 SKOR2Q2VWA4 1001 aaPredicted RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 ZSCAN23Q3MJ62 389 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 C5orf22Q49AR2 442 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 HSF5Q4G112 596 aaPredicted RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 LY6G5CQ5SRR4 150 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 MPP7Q5T2T1 576 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 TMEM164Q5U3C3 297 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 EMC10Q5UCC4 262 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 CC2D1AQ6P1N0 951 aaPredicted RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 TREML4Q6UXN2 200 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 FAM183BPQ6ZVS7 135 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 CYP4V2Q6ZWL3 525 aaPredicted RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 SYT13Q7L8C5 426 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 TADA2BQ86TJ2 420 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 GAS2L3Q86XJ1 694 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 ZDHHC17Q8IUH5 632 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 ZNF683Q8IZ20 524 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 FRMD1Q8N878 549 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 USP33Q8TEY7 942 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 CD101Q93033 1021 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 ACOX2Q99424 681 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 P2RY13Q9BPV8 354 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 EDEM3Q9BZQ6 932 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 DCLK3Q9C098 648 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 NAT10Q9H0A0 1025 aaKnown RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 SEMA4AQ9H3S1 761 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 LRRC4Q9HBW1 653 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 TAS2R14Q9NYV8 317 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 AIPL1Q9NZN9 384 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 MARCH2Q9P0N8 246 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 NAGPAQ9UK23 515 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 TMEM59LQ9UK28 342 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 AGO1Q9UL18 857 aaKnown RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 NDRG2Q9UN36 371 aaKnown RBP5.96□□□□□ -1.46
CUX1-208ENST00000485792 NAALADL1Q9UQQ1 740 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 TLR6Q9Y2C9 796 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 SNX10Q9Y5X0 201 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 R4GN57 208 aa5.96□□□□□ -1.46
CUX1-208ENST00000485792 ASPMQ8IZT6 3477 aa5.95□□□□□ -1.46
CUX1-208ENST00000485792 GOLGA6L7A0A1B0GV03 622 aa5.95□□□□□ -1.46
CUX1-208ENST00000485792 SMTNL1A8MU46 457 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms