RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 WASH3PC4AMC7 463 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 GFRA2O00451 464 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 RHOBTB1O94844 696 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 CALB1P05937 261 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 TPM3P06753 285 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 HNRNPLP14866 589 aaKnown RBP eCLIP12.95□□□□□ -0.34
PTCD1-205ENST00000485746 HLA-FP30511 346 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 ELF2Q15723 593 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 SLC25A52Q3SY17 297 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 SERPINA13PQ6UXR4 307 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 KBTBD6Q86V97 674 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 C11orf74Q86VG3 221 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 DCLK2Q8N568 766 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 MDGA1Q8NFP4 955 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 CYB5D2Q8WUJ1 264 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 SORCS1Q8WY21 1168 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 RPRD1AQ96P16 312 aaPredicted RBP12.95□□□□□ -0.34
PTCD1-205ENST00000485746 PCDHB18PQ96TA0 734 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 NPY6RQ99463 290 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 NUP58Q9BVL2 599 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 THAP10Q9P2Z0 257 aaPredicted RBP12.95□□□□□ -0.34
PTCD1-205ENST00000485746 RAD54BQ9Y620 910 aa12.95□□□□□ -0.34
PTCD1-205ENST00000485746 TMCO5BA8MYB1 307 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 DCLK1O15075 740 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 LUC7L3O95232 432 aaKnown RBP12.94□□□□□ -0.34
PTCD1-205ENST00000485746 EPHX1P07099 455 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 RETP07949 1114 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 UNGP13051 313 aaPredicted RBP12.94□□□□□ -0.34
PTCD1-205ENST00000485746 PDGFRAP16234 1089 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 DESP17661 470 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 MMP8P22894 467 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 CD70P32970 193 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 ST8SIA6P61647 398 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 ATP11AP98196 1134 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 ZNF234Q14588 700 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 BRMS1LQ5PSV4 323 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 TTC39BQ5VTQ0 682 aaPredicted RBP12.94□□□□□ -0.34
PTCD1-205ENST00000485746 RNF219Q5W0B1 726 aaPredicted RBP12.94□□□□□ -0.34
PTCD1-205ENST00000485746 MBLAC2Q68D91 279 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 KIAA1324Q6UXG2 1013 aaKnown RBP12.94□□□□□ -0.34
PTCD1-205ENST00000485746 LRRC31Q6UY01 552 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 RASSF3Q86WH2 238 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 KIAA2013Q8IYS2 634 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 FAM160A2Q8N612 972 aaPredicted RBP12.94□□□□□ -0.34
PTCD1-205ENST00000485746 GPR161Q8N6U8 529 aaKnown RBP12.94□□□□□ -0.34
PTCD1-205ENST00000485746 FIBINQ8TAL6 211 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 CPLX3Q8WVH0 158 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 CFAP57Q96MR6 1250 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 PRICKLE1Q96MT3 831 aaPredicted RBP12.94□□□□□ -0.34
PTCD1-205ENST00000485746 TKTL2Q9H0I9 626 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 KIAA1522Q9P206 1035 aaPredicted RBP12.94□□□□□ -0.34
PTCD1-205ENST00000485746 HCN2Q9UL51 889 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 CACNA1IQ9P0X4 2223 aa12.94□□□□□ -0.34
PTCD1-205ENST00000485746 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-205ENST00000485746 PAGE1O75459 146 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 ADCY5O95622 1261 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 ACADMP11310 421 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 KRT3P12035 628 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 TFE3P19532 575 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-205ENST00000485746 SDC4P31431 198 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
PTCD1-205ENST00000485746 FLT3P36888 993 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 IL12RB1P42701 662 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 KLHL30Q0D2K2 578 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 LMAN2Q12907 356 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 ZNF177Q13360 481 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-205ENST00000485746 AUHQ13825 339 aaKnown RBP12.93□□□□□ -0.34
PTCD1-205ENST00000485746 NFKBIBQ15653 356 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 CDO1Q16878 200 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 ACAD10Q6JQN1 1059 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 PPP1R2P3Q6NXS1 205 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 FBXL22Q6P050 247 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 DNAJC24Q6P3W2 148 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 IRF2BP2Q7Z5L9 587 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 CIR1Q86X95 450 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-205ENST00000485746 EMC1Q8N766 993 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTCD1-205ENST00000485746 WFDC5Q8TCV5 224 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 RXFP2Q8WXD0 754 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 RLN3Q8WXF3 142 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 BAP1Q92560 729 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 MYEOVQ96EZ4 313 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 PPP1R9BQ96SB3 815 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 GABRG3Q99928 467 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 EDEM3Q9BZQ6 932 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 PIGVQ9NUD9 493 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 TMEM59LQ9UK28 342 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 VANGL2Q9ULK5 521 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 HS3ST4Q9Y661 456 aa12.93□□□□□ -0.34
PTCD1-205ENST00000485746 A0A1W2PQF6 199 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 CBFA2T2O43439 604 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 GJB6O95452 261 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 ASLP04424 464 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 DLDP09622 509 aaKnown RBP12.92□□□□□ -0.34
PTCD1-205ENST00000485746 CHRM1P11229 460 aaPredicted RBP12.92□□□□□ -0.34
PTCD1-205ENST00000485746 GABRG2P18507 467 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 CSKP41240 450 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 CXCR3P49682 368 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 ATXN1P54253 815 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms