RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 RABGAP1LQ5R372 815 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 PIK3R6Q5UE93 754 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 TTC39BQ5VTQ0 682 aaPredicted RBP8.1□□□□□ -1.11
MACF1-220ENST00000485063 RAP1GAP2Q684P5 730 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 DNAJC24Q6P3W2 148 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 RFWD3Q6PCD5 774 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 DCUN1D2Q6PH85 259 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 TSSK4Q6SA08 328 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 ANKS1BQ7Z6G8 1248 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 MFN1Q8IWA4 741 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 LGI2Q8N0V4 545 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 C3orf20Q8ND61 904 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 WFIKKN2Q8TEU8 576 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 USP33Q8TEY7 942 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 TRIM11Q96F44 468 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 PGAP3Q96FM1 320 aaPredicted RBP8.1□□□□□ -1.11
MACF1-220ENST00000485063 PPP1R9BQ96SB3 815 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 PCDHB18PQ96TA0 734 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 TRIM5Q9C035 493 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 TKTL2Q9H0I9 626 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 ZSCAN32Q9NX65 697 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 STIM2Q9P246 746 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 TMEM59LQ9UK28 342 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 FBXO10Q9UK96 956 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 MMP17Q9ULZ9 603 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 SLC27A6Q9Y2P4 619 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 STARD13Q9Y3M8 1113 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 PCDHGA2Q9Y5H1 932 aa8.1□□□□□ -1.11
MACF1-220ENST00000485063 GOLGA6L7A0A1B0GV03 622 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 SIGLEC16A6NMB1 481 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 RTN2O75298 545 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 MOCS3O95396 460 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 KLF8O95600 359 aaPredicted RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 GYPCP04921 128 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 ATP5BP06576 529 aaKnown RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 CISD3P0C7P0 127 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 SKILP12757 684 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 GPD1P21695 349 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 HOXD9P28356 352 aaPredicted RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 NTSR1P30989 418 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 SLC6A4P31645 630 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 CNR2P34972 360 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 FLT3P36888 993 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 PLA2G5P39877 138 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 NBL1P41271 181 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 KIR2DL1P43626 348 aaPredicted RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 CXCR3P49682 368 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 DGKEP52429 567 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 OXCT1P55809 520 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 PITX1P78337 314 aaPredicted RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 ATP11AP98196 1134 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 EIF4EBP2Q13542 120 aaPredicted RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 CDO1Q16878 200 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 FAM133BQ5BKY9 247 aaKnown RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 LRRC31Q6UY01 552 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 MON1BQ7L1V2 547 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 STRADAQ7RTN6 431 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 ZNF571Q7Z3V5 609 aaPredicted RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 PHLDB2Q86SQ0 1253 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 LONP2Q86WA8 852 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 CHPFQ8IZ52 775 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 MCOLN2Q8IZK6 566 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 MAML2Q8IZL2 1156 aaPredicted RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 AHI1Q8N157 1196 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 PHTF2Q8N3S3 785 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 CARNMT1Q8N4J0 409 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 CCDC33Q8N5R6 958 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 ALLCQ8N6M5 410 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 EMC1Q8N766 993 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 TXNDC5Q8NBS9 432 aaKnown RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 TSTD1Q8NFU3 115 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 RXFP2Q8WXD0 754 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 EZH1Q92800 747 aaPredicted RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 NKD2Q969F2 451 aaPredicted RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 NT5C3BQ969T7 300 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 CFAP57Q96MR6 1250 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 RPRD1AQ96P16 312 aaPredicted RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 TBCBQ99426 244 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 CIPCQ9C0C6 399 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 SIK2Q9H0K1 926 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 DEF6Q9H4E7 631 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 MRPL47Q9HD33 250 aaKnown RBP8.09□□□□□ -1.11
MACF1-220ENST00000485063 PARVAQ9NVD7 372 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 FAM86C1Q9NVL1 165 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 RAB23Q9ULC3 237 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 PLA2G4CQ9UP65 541 aa8.09□□□□□ -1.11
MACF1-220ENST00000485063 FANCMQ8IYD8 2048 aa8.08□□□□□ -1.12
MACF1-220ENST00000485063 CCDC163A0A0D9SF12 145 aa8.08□□□□□ -1.12
MACF1-220ENST00000485063 A0A1B0GVM2 712 aa8.08□□□□□ -1.12
MACF1-220ENST00000485063 TCAF2A6NFQ2 919 aa8.08□□□□□ -1.12
MACF1-220ENST00000485063 PRRT4C9JH25 899 aa8.08□□□□□ -1.12
MACF1-220ENST00000485063 GFRA2O00451 464 aa8.08□□□□□ -1.12
MACF1-220ENST00000485063 TRIM24O15164 1050 aa8.08□□□□□ -1.12
MACF1-220ENST00000485063 PAGE1O75459 146 aa8.08□□□□□ -1.12
MACF1-220ENST00000485063 LUC7L3O95232 432 aaKnown RBP8.08□□□□□ -1.12
MACF1-220ENST00000485063 APBB3O95704 486 aa8.08□□□□□ -1.12
MACF1-220ENST00000485063 FTLP02792 175 aaPredicted RBP8.08□□□□□ -1.12
MACF1-220ENST00000485063 MYBL1P10243 752 aa8.08□□□□□ -1.12
MACF1-220ENST00000485063 PABPC1P11940 636 aaKnown RBP8.08□□□□□ -1.12
MACF1-220ENST00000485063 HOXB2P14652 356 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms