RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 POLR2EP19388 210 aaKnown RBP11.91□□□□□ -0.5
SCFD1-206ENST00000484733 SPINK2P20155 84 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 SLC6A4P31645 630 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 RPS14P62263 151 aaKnown RBP11.91□□□□□ -0.5
SCFD1-206ENST00000484733 ARID5BQ14865 1188 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 NADSYN1Q6IA69 706 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 RRAGAQ7L523 313 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 RAB44Q7Z6P3 723 aaPredicted RBP11.91□□□□□ -0.5
SCFD1-206ENST00000484733 DQX1Q8TE96 717 aaKnown RBP11.91□□□□□ -0.5
SCFD1-206ENST00000484733 CLEC4CQ8WTT0 213 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 CYB5D2Q8WUJ1 264 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 FAM81BQ96LP2 452 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 SLC4A5Q9BY07 1137 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 INTS2Q9H0H0 1204 aaKnown RBP11.91□□□□□ -0.5
SCFD1-206ENST00000484733 CTNND2Q9UQB3 1225 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 PCDHGB2Q9Y5G2 931 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 GTF3C3Q9Y5Q9 886 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 SH3BP5O60239 455 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 FGFR1OPO95684 399 aaKnown RBP11.9□□□□□ -0.5
SCFD1-206ENST00000484733 FAM193AP78312 1265 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 PAK1Q13153 545 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 KLHL10Q6JEL2 608 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 RFWD3Q6PCD5 774 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 DBX2Q6ZNG2 339 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 ENOSF1Q7L5Y1 443 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 GLRX5Q86SX6 157 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 ZCCHC9Q8N567 271 aaKnown RBP11.9□□□□□ -0.5
SCFD1-206ENST00000484733 WFDC5Q8TCV5 224 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 SGK2Q9HBY8 427 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 ZMIZ1Q9ULJ6 1067 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 SCML1Q9UN30 329 aa11.9□□□□□ -0.5
SCFD1-206ENST00000484733 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.9□□□□□ -0.5
SCFD1-206ENST00000484733 MAP1BP46821 2468 aaKnown RBP11.9□□□□□ -0.5
SCFD1-206ENST00000484733 EPG5Q9HCE0 2579 aa11.9□□□□□ -0.51
SCFD1-206ENST00000484733 MED7O43513 233 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 HYAL3O43820 417 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-206ENST00000484733 CER1O95813 267 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 CD70P32970 193 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 BNC1Q01954 994 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 TRIP6Q15654 476 aaKnown RBP11.89□□□□□ -0.51
SCFD1-206ENST00000484733 MS4A13Q5J8X5 152 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 TMEM110Q86TL2 294 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 NAXDQ8IW45 347 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 MYO19Q96H55 970 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 SRRTQ9BXP5 876 aaKnown RBP11.89□□□□□ -0.51
SCFD1-206ENST00000484733 MIS12Q9H081 205 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 LAMA1P25391 3075 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 PIK3R2O00459 728 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 CBFA2T3O75081 653 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 CALCAP01258 141 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 MATKP42679 507 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 SFSWAPQ12872 951 aaKnown RBP11.89□□□□□ -0.51
SCFD1-206ENST00000484733 ZNF776Q68DI1 518 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-206ENST00000484733 USP30Q70CQ3 517 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 MFN1Q8IWA4 741 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 ADAMTS14Q8WXS8 1223 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 PRICKLE1Q96MT3 831 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-206ENST00000484733 BTBD1Q9H0C5 482 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 MIR1-1HGQ9H1L0 117 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 RSPH9Q9H1X1 276 aaPredicted RBP11.89□□□□□ -0.51
SCFD1-206ENST00000484733 EIF2B4Q9UI10 523 aaKnown RBP11.89□□□□□ -0.51
SCFD1-206ENST00000484733 PCDHB9Q9Y5E1 797 aa11.89□□□□□ -0.51
SCFD1-206ENST00000484733 GON4LQ3T8J9 2241 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 ITIH6Q6UXX5 1313 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 TYW5A2RUC4 315 aaKnown RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 IGLV3-25P01717 112 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 DNTTP04053 509 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 SRPRAP08240 638 aaKnown RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 EIF4EBP2Q13542 120 aaPredicted RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 DENND1BQ6P3S1 775 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 SCUBE3Q8IX30 993 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 MRGPRX3Q96LB0 322 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 C6orf106Q9H6K1 298 aaPredicted RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 GAREM1Q9H706 876 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 UBE2TQ9NPD8 197 aaPredicted RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 KLK13Q9UKR3 277 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 INTS6Q9UL03 887 aaKnown RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 NAALADL1Q9UQQ1 740 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 CACNA1EQ15878 2313 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 TARSL2A2RTX5 802 aaKnown RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 SEMA4FO95754 770 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 ACSL1P33121 698 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 STX17P56962 302 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 ST8SIA6P61647 398 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 TTC31Q49AM3 519 aaPredicted RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 TAC4Q86UU9 113 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 CCDC117Q8IWD4 279 aaPredicted RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 ZNF606Q8WXB4 792 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 CAMK1GQ96NX5 476 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 MED15Q96RN5 788 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 PABPC3Q9H361 631 aaKnown RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 KIAA1522Q9P206 1035 aaPredicted RBP11.88□□□□□ -0.51
SCFD1-206ENST00000484733 STIM2Q9P246 746 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 PCOLCE2Q9UKZ9 415 aa11.88□□□□□ -0.51
SCFD1-206ENST00000484733 C10orf142B7Z368 130 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 PAPSS1O43252 624 aaPredicted RBP11.87□□□□□ -0.51
SCFD1-206ENST00000484733 KRT5P13647 590 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 CD27P26842 260 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 CSKP41240 450 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms