RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 SLC1A6P48664 564 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 SULT1E1P49888 294 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 KDSRQ06136 332 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 PDE1CQ14123 709 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-215ENST00000484252 TTLL12Q14166 644 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-215ENST00000484252 KIZQ2M2Z5 673 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 TEDDM1Q5T9Z0 273 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 ZCCHC23Q6ZST2 131 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 ZNF467Q7Z7K2 595 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-215ENST00000484252 ULK2Q8IYT8 1036 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 ARNTL2Q8WYA1 636 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 P2RY11Q96G91 374 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 LGMNQ99538 433 aa20.24■□□□□ 0.83
LIMS2-215ENST00000484252 EIF2AQ9BY44 585 aaKnown RBP20.24■□□□□ 0.83
LIMS2-215ENST00000484252 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-215ENST00000484252 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.24■□□□□ 0.83
LIMS2-215ENST00000484252 PRR5-ARHGAP8B1AHC4 643 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 XPOTO43592 962 aaKnown RBP20.23■□□□□ 0.83
LIMS2-215ENST00000484252 ITGA2BP08514 1039 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 PEX19P40855 299 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 SESN2P58004 480 aaPredicted RBP20.23■□□□□ 0.83
LIMS2-215ENST00000484252 ARHGAP8P85298 464 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 PYROXD2Q8N2H3 581 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 GPRC5AQ8NFJ5 357 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 PPP4R1Q8TF05 950 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 GPAMQ9HCL2 828 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 DNAJC16Q9Y2G8 782 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 MFHAS1Q9Y4C4 1052 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 KPNA7A9QM74 516 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 PDHA1P08559 390 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 MYL4P12829 197 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 ADORA2AP29274 412 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 ACTR3P61158 418 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 MXRA7P84157 204 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 SPANXN3Q5MJ09 141 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 C16orf46Q6P387 395 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 MOB2Q70IA6 237 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 FAM131BQ86XD5 332 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 UNC5BQ8IZJ1 945 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 DEFB106AQ8N104 65 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 DTX3LQ8TDB6 740 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 SLC2A14Q8TDB8 520 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 RNF139Q8WU17 664 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 TNIP3Q96KP6 325 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 EBF4Q9BQW3 602 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 KATNBL1Q9H079 304 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 IGSF9Q9P2J2 1179 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 TXNDC16Q9P2K2 825 aa20.23■□□□□ 0.83
LIMS2-215ENST00000484252 APOBEC2Q9Y235 224 aaKnown RBP20.23■□□□□ 0.83
LIMS2-215ENST00000484252 RECQL4O94761 1208 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 DDNO94850 711 aaPredicted RBP20.22■□□□□ 0.83
LIMS2-215ENST00000484252 TOP3BO95985 862 aaKnown RBP20.22■□□□□ 0.83
LIMS2-215ENST00000484252 POLBP06746 335 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 RPL10AP62906 217 aaKnown RBP20.22■□□□□ 0.83
LIMS2-215ENST00000484252 IRX4P78413 519 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 PDE1BQ01064 536 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 TUBB3Q13509 450 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 PAFAH1B3Q15102 231 aaKnown RBP20.22■□□□□ 0.83
LIMS2-215ENST00000484252 MDH1BQ5I0G3 518 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 GLRA4Q5JXX5 417 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 MYLK4Q86YV6 388 aaPredicted RBP20.22■□□□□ 0.83
LIMS2-215ENST00000484252 APPL2Q8NEU8 664 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 FBXO27Q8NI29 283 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 CDCA5Q96FF9 252 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 THTPAQ9BU02 230 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 VCXQ9H320 206 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 DNAJC28Q9NX36 388 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 ADAM28Q9UKQ2 775 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 SOX13Q9UN79 622 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 HCRTO43612 131 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 PROCP04070 461 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 MMP3P08254 477 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 LMO2P25791 158 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 GP5P40197 560 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 AP2B1P63010 937 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 CRADDP78560 199 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 PCLAFQ15004 111 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 RABGAP1LQ5R372 815 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 GRTP1Q5TC63 336 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 RIPOR1Q6ZS17 1223 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 LIMS2Q7Z4I7 341 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 RASSF3Q86WH2 238 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 SPDYE1Q8NFV5 336 aaPredicted RBP20.22■□□□□ 0.83
LIMS2-215ENST00000484252 CPNE1Q99829 537 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 APOL6Q9BWW8 343 aa20.22■□□□□ 0.83
LIMS2-215ENST00000484252 SBF1O95248 1867 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 ITM2AO43736 263 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 GPR32O75388 356 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 LINGO3P0C6S8 592 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 MX2P20592 715 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 AXLP30530 894 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 NOS2P35228 1153 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 IFRD2Q12894 506 aaPredicted RBP20.21■□□□□ 0.83
LIMS2-215ENST00000484252 DGKDQ16760 1214 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 SV2CQ496J9 727 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 BNIPLQ7Z465 357 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 NT5C3BQ969T7 300 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 ZNF778Q96MU6 729 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 SYBUQ9NX95 663 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 STAP1Q9ULZ2 295 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms