RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CD180Q99467 661 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 PI4K2AQ9BTU6 479 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 NDC1Q9BTX1 674 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 MRI1Q9BV20 369 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 PHF7Q9BWX1 381 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-214ENST00000483925 DNAI2Q9GZS0 605 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 NDST4Q9H3R1 872 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 KAT14Q9H8E8 782 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 PLEKHA2Q9HB19 425 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 CYP4F11Q9HBI6 524 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 ARHGEF3Q9NR81 526 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 FBXO34Q9NWN3 711 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 AURKAIP1Q9NWT8 199 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-214ENST00000483925 ING3Q9NXR8 418 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 HCN3Q9P1Z3 774 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 MARCH4Q9P2E8 410 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-214ENST00000483925 DNMT3BQ9UBC3 853 aaKnown RBP4.78□□□□□ -1.64
PTCD3-214ENST00000483925 DNAJB11Q9UBS4 358 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 HESX1Q9UBX0 185 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 SARDHQ9UL12 918 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 USP22Q9UPT9 525 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 AGTPBP1Q9UPW5 1226 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 HDAC5Q9UQL6 1122 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 ENTPD2Q9Y5L3 495 aa4.78□□□□□ -1.64
PTCD3-214ENST00000483925 LIPT2A6NK58 231 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 BCAT2O15382 392 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 DHHO43323 396 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 CER1O95813 267 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 TUBB4AP04350 444 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 SNRPA1P09661 255 aaKnown RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 HLA-DPA1P20036 260 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 LRPAP1P30533 357 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 HPDP32754 393 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 MSX2P35548 267 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 ADCY8P40145 1251 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 CAPZA2P47755 286 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 CTCFP49711 727 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 MRE11P49959 708 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 PPP5CP53041 499 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 EIF3BP55884 814 aaKnown RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 MRPS35P82673 323 aaKnown RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 HHEXQ03014 270 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 KRT17Q04695 432 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 AP1B1Q10567 949 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 TCF15Q12870 199 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 TUBA3CQ13748 450 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 TNFAIP1Q13829 316 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 RAB41Q5JT25 222 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 UTP14CQ5TAP6 766 aaKnown RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 ALKBH5Q6P6C2 394 aaKnown RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 TUBA3EQ6PEY2 450 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 NCEH1Q6PIU2 408 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 PET117Q6UWS5 81 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 LARP4Q71RC2 724 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 LRRC71Q8N4P6 559 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 WDTC1Q8N5D0 677 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 POGLUT1Q8NBL1 392 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 LSM14AQ8ND56 463 aaKnown RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 LINS1Q8NG48 757 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 GABPB2Q8TAK5 448 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 ARHGEF2Q92974 986 aaKnown RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 LPPQ93052 612 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 RMDN1Q96DB5 314 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 MYOCQ99972 504 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 TRIM5Q9C035 493 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 STN1Q9H668 368 aaKnown RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 SYNPO2LQ9H987 977 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 RMI1Q9H9A7 625 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 COPS7BQ9H9Q2 264 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 PFDN4Q9NQP4 134 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 FSCN3Q9NQT6 498 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 GIMAP4Q9NUV9 329 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 ADPRHL2Q9NX46 363 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 ZDHHC7Q9NXF8 308 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 ALKBH4Q9NXW9 302 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 CPSF2Q9P2I0 782 aaKnown RBP4.77□□□□□ -1.65
PTCD3-214ENST00000483925 SLC23A1Q9UHI7 598 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 MOSPD1Q9UJG1 213 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 ANAPC5Q9UJX4 755 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 AGAP1Q9UPQ3 857 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 KCNE2Q9Y6J6 123 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 ABCC9O60706 1549 aa4.77□□□□□ -1.65
PTCD3-214ENST00000483925 A0A087X1B8 175 aa4.76□□□□□ -1.65
PTCD3-214ENST00000483925 SH2D7A6NKC9 451 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-214ENST00000483925 C16orf96A6NNT2 1141 aa4.76□□□□□ -1.65
PTCD3-214ENST00000483925 A8MV72 311 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-214ENST00000483925 ADAM20O43506 726 aa4.76□□□□□ -1.65
PTCD3-214ENST00000483925 TNFSF14O43557 240 aa4.76□□□□□ -1.65
PTCD3-214ENST00000483925 HNRNPCL1O60812 293 aaKnown RBP4.76□□□□□ -1.65
PTCD3-214ENST00000483925 SRGAP2O75044 1071 aa4.76□□□□□ -1.65
PTCD3-214ENST00000483925 KIF20AO95235 890 aa4.76□□□□□ -1.65
PTCD3-214ENST00000483925 GGPS1O95749 300 aa4.76□□□□□ -1.65
PTCD3-214ENST00000483925 EIF2S1P05198 315 aaKnown RBP4.76□□□□□ -1.65
PTCD3-214ENST00000483925 CCDC175P0C221 793 aa4.76□□□□□ -1.65
PTCD3-214ENST00000483925 ATXN1LP0C7T5 689 aaKnown RBP4.76□□□□□ -1.65
PTCD3-214ENST00000483925 P4HA1P13674 534 aa4.76□□□□□ -1.65
PTCD3-214ENST00000483925 FDXRP22570 491 aa4.76□□□□□ -1.65
PTCD3-214ENST00000483925 TCF7P36402 384 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-214ENST00000483925 TPD52P55327 224 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms