RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 FPGSQ05932 587 aa27.05■■□□□ 1.92
SHOX2-204ENST00000483851 PPP1R21Q6ZMI0 780 aa27.05■■□□□ 1.92
SHOX2-204ENST00000483851 C16orf59Q7L2K0 433 aa27.05■■□□□ 1.92
SHOX2-204ENST00000483851 HTR3CQ8WXA8 447 aa27.05■■□□□ 1.92
SHOX2-204ENST00000483851 SSX2IPQ9Y2D8 614 aa27.05■■□□□ 1.92
SHOX2-204ENST00000483851 PAGE1O75459 146 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 STK10O94804 968 aaKnown RBP27.04■■□□□ 1.92
SHOX2-204ENST00000483851 RPL17P18621 184 aaKnown RBP27.04■■□□□ 1.92
SHOX2-204ENST00000483851 EPHB2P29323 1055 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 ATP1A2P50993 1020 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 SNX30Q5VWJ9 437 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 TADA2BQ86TJ2 420 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 GPR152Q8TDT2 470 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 FNIP2Q9P278 1114 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 MFHAS1Q9Y4C4 1052 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 ARL4CP56559 192 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 TBX4P57082 545 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 ZNF33AQ06730 810 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 TRIP4Q15650 581 aaPredicted RBP27.04■■□□□ 1.92
SHOX2-204ENST00000483851 MANEALQ5VSG8 457 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 STKLD1Q8NE28 680 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 ROPN1BQ9BZX4 212 aaPredicted RBP27.04■■□□□ 1.92
SHOX2-204ENST00000483851 ROPN1Q9HAT0 212 aaPredicted RBP27.04■■□□□ 1.92
SHOX2-204ENST00000483851 LRRC4CQ9HCJ2 640 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 SLC12A6Q9UHW9 1150 aa27.04■■□□□ 1.92
SHOX2-204ENST00000483851 C2CD2LO14523 706 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 ALOX15BO15296 676 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 MTSS1O43312 755 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 MSI1O43347 362 aaKnown RBP27.03■■□□□ 1.92
SHOX2-204ENST00000483851 MAP3K6O95382 1288 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 CSH1P0DML2 217 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 CSH2P0DML3 217 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 MAGEA4P43358 317 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 BASP1P80723 227 aaKnown RBP27.03■■□□□ 1.92
SHOX2-204ENST00000483851 RING1Q06587 406 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 KCNJ11Q14654 390 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 HIF1AQ16665 826 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 LZTR1Q8N653 840 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 FCRL2Q96LA5 508 aaPredicted RBP27.03■■□□□ 1.92
SHOX2-204ENST00000483851 CATSPERBQ9H7T0 1116 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 MRPL17Q9NRX2 175 aaKnown RBP27.03■■□□□ 1.92
SHOX2-204ENST00000483851 INSL6Q9Y581 213 aa27.03■■□□□ 1.92
SHOX2-204ENST00000483851 ABHD2P08910 425 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 MLLT6P55198 1093 aaPredicted RBP27.02■■□□□ 1.92
SHOX2-204ENST00000483851 RASIP1Q5U651 963 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 PSRC1Q6PGN9 363 aaPredicted RBP27.02■■□□□ 1.92
SHOX2-204ENST00000483851 FIBCD1Q8N539 461 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 MYRFLQ96LU7 910 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 NINJ2Q9NZG7 142 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 KIAA1671Q9BY89 1806 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 ZBBXA8MT70 800 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 E7ESA3 106 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 APOEP02649 317 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 TTC19Q6DKK2 380 aaPredicted RBP27.02■■□□□ 1.92
SHOX2-204ENST00000483851 VPS52Q8N1B4 723 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 ATP6V0D2Q8N8Y2 350 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 GIPC2Q8TF65 315 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 TBC1D31Q96DN5 1066 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 PRDM12Q9H4Q4 367 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 RAB6BQ9NRW1 208 aa27.02■■□□□ 1.92
SHOX2-204ENST00000483851 A0A0A0MRY4 1105 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 SRRM3A6NNA2 597 aaPredicted RBP27.01■■□□□ 1.91
SHOX2-204ENST00000483851 OPHN1O60890 802 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 MDH1P40925 334 aaKnown RBP27.01■■□□□ 1.91
SHOX2-204ENST00000483851 GALNT2Q10471 571 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 B4GALNT4Q76KP1 1039 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 PDIK1LQ8N165 341 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 ARFGAP2Q8N6H7 521 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 CLP1Q92989 425 aaKnown RBP27.01■■□□□ 1.91
SHOX2-204ENST00000483851 TLCD1Q96CP7 247 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 HDAC11Q96DB2 347 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 TRMT2BQ96GJ1 504 aaKnown RBP27.01■■□□□ 1.91
SHOX2-204ENST00000483851 SPATA13Q96N96 652 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 SAYSD1Q9NPB0 183 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 DONSONQ9NYP3 566 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 MARCH2Q9P0N8 246 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 XPO7Q9UIA9 1087 aaKnown RBP27.01■■□□□ 1.91
SHOX2-204ENST00000483851 NUDT5Q9UKK9 219 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 NEU3Q9UQ49 428 aa27.01■■□□□ 1.91
SHOX2-204ENST00000483851 SEC24AO95486 1093 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 IGLV3-27P01718 113 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 EN2P19622 333 aaPredicted RBP27■■□□□ 1.91
SHOX2-204ENST00000483851 ALDH1A3P47895 512 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 PPIDQ08752 370 aaKnown RBP27■■□□□ 1.91
SHOX2-204ENST00000483851 EFEMP1Q12805 493 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 KYNUQ16719 465 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 ANKRD22Q5VYY1 191 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 KLHDC10Q6PID8 442 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 BADQ92934 168 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 PWWP2AQ96N64 755 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 LGMNQ99538 433 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 MCOLN1Q9GZU1 580 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 SIK2Q9H0K1 926 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 RXFP1Q9HBX9 757 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 TCEA3O75764 348 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 SHBGP04278 402 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 VAV1P15498 845 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 FDFT1P37268 417 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 PPP3CCP48454 512 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 KRT71Q3SY84 523 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms