RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 RFPL3SP0C7P2 107 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 FGFR2P21802 821 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 SLC5A2P31639 672 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 CIITAP33076 1130 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 ASIC2Q16515 512 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 GLE1Q53GS7 698 aaKnown RBP3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 ARHGAP15Q53QZ3 475 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 ZNF324BQ6AW86 544 aaPredicted RBP3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 TLDC1Q6P9B6 456 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 SKAP1Q86WV1 359 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 DDIASQ8IXT1 998 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 SMC5Q8IY18 1101 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 EXOC8Q8IYI6 725 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 CCDC33Q8N5R6 958 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 TTC8Q8TAM2 541 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 LPAR1Q92633 364 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 GRAMD1AQ96CP6 724 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 EIF3CQ99613 913 aaKnown RBP3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 WDR83Q9BRX9 315 aaKnown RBP3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 NTPCRQ9BSD7 190 aaKnown RBP3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 HTATIP2Q9BUP3 242 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 MAGEB5Q9BZ81 275 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 PRDM11Q9NQV5 511 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 LAMP3Q9UQV4 416 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 INSL5Q9Y5Q6 135 aa3.55□□□□□ -1.84
LAPTM4A-202ENST00000483117 CCDC194A0A1B0GVG4 234 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 DPPA5A6NC42 116 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 RHODO00212 210 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 SPTLC2O15270 562 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 KAT7O95251 611 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 NDST3O95803 873 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 MYL4P12829 197 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 PECAM1P16284 738 aaPredicted RBP3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 ATP1A4Q13733 1029 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 KIAA1755Q5JYT7 1200 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 ISM2Q6H9L7 571 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 HMBOX1Q6NT76 420 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 IQCF1Q8N6M8 205 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 RNF152Q8N8N0 203 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 CCDC150Q8NCX0 1101 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 INPP5DQ92835 1189 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 ATP2A3Q93084 1043 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 LMLNQ96KR4 655 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 ZNF347Q96SE7 839 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 ABHD14AQ9BUJ0 271 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 SF3B5Q9BWJ5 86 aaKnown RBP3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 VPS33BQ9H267 617 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 PRDM16Q9HAZ2 1276 aa3.54□□□□□ -1.84
LAPTM4A-202ENST00000483117 RPS10-NUDT3A0A1W2PQS6 291 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 EME2A4GXA9 379 aaPredicted RBP3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 OR2W5A6NFC9 320 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 IFITM10A6NMD0 228 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 SGPL1O95470 568 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 TSHRP16473 764 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 GABRB3P28472 473 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 HYAL1Q12794 435 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 USP17L6PQ6QN14 398 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 TRILQ7L0X0 811 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 KRT27Q7Z3Y8 459 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 GPSM1Q86YR5 675 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 FAM47BQ8NA70 645 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 NUDCD2Q8WVJ2 157 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 CENPIQ92674 756 aaPredicted RBP3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 MEIS3Q99687 375 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 UBA5Q9GZZ9 404 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 ERVK-5Q9HDB9 667 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 SLC52A1Q9NWF4 448 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 MYO1AQ9UBC5 1043 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 SLC8A2Q9UPR5 921 aa3.53□□□□□ -1.84
LAPTM4A-202ENST00000483117 SERINC4A6NH21 518 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 PPP6R2O75170 966 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 CNTN5O94779 1100 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 IFNA2P01563 188 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 SRGAP2BP0DMP2 458 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 EGR1P18146 543 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 ATF3P18847 181 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 MLH1P40692 756 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 CASP5P51878 434 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 SLC37A1P57057 533 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 LTBQ06643 244 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 SLC5A9Q2M3M2 681 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 CAPRIN2Q6IMN6 1127 aaKnown RBP3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 MSANTD2Q6P1R3 559 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 LRIG3Q6UXM1 1119 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 BEND5Q7L4P6 421 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 CTU1Q7Z7A3 348 aaKnown RBP3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 SPATA2LQ8IUW3 424 aaPredicted RBP3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 WDR75Q8IWA0 830 aaKnown RBP3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 OR52N4Q8NGI2 321 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 NPIPB3Q92617 1050 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 KAT2AQ92830 837 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 PMM1Q92871 262 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 MED30Q96HR3 178 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 FAM84BQ96KN1 310 aaPredicted RBP3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 SNX27Q96L92 541 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 SPAG4Q9NPE6 437 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 FSCN3Q9NQT6 498 aa3.52□□□□□ -1.85
LAPTM4A-202ENST00000483117 SIRT3Q9NTG7 399 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms