RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 LSM12Q3MHD2 195 aaKnown RBP7.1□□□□□ -1.27
CLK1-212ENST00000482590 HSDL1Q3SXM5 330 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 ZMAT1Q5H9K5 638 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 CELF3Q5SZQ8 465 aaKnown RBP7.1□□□□□ -1.27
CLK1-212ENST00000482590 HECTD3Q5T447 861 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 TTC22Q5TAA0 569 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 STOX1Q6ZVD7 989 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 ESX1Q8N693 406 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 TEX9Q8N6V9 391 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 IGSF22Q8N9C0 903 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 NCOA7Q8NI08 942 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 IL31RAQ8NI17 732 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 EXOC6Q8TAG9 804 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 CUL5Q93034 780 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 ATP6V0A1Q93050 837 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 OR14A2Q96R54 314 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 CTAGE1Q96RT6 745 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 RAD9AQ99638 391 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 C1QTNF1Q9BXJ1 281 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 B3GNT5Q9BYG0 378 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 ARGLU1Q9NWB6 273 aaPredicted RBP7.1□□□□□ -1.27
CLK1-212ENST00000482590 SLC13A4Q9UKG4 626 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 ZNF215Q9UL58 517 aaPredicted RBP7.1□□□□□ -1.27
CLK1-212ENST00000482590 TRAF6Q9Y4K3 522 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 MYO7AQ13402 2215 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 FRMPD4Q14CM0 1322 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 FSD2A1L4K1 749 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 LINC01553A4QN01 128 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 FAM90A27PA6NNH2 459 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 MASP2O00187 686 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 NCK2O43639 380 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 B3GALT2O43825 422 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 LPXNO60711 386 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 STAM2O75886 525 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 UBXN7O94888 489 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 TBX18O95935 607 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 CYP21A2P08686 494 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 C1SP09871 688 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 PEX19P40855 299 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 BPIFB3P59826 476 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 PSMC1P62191 440 aaKnown RBP7.09□□□□□ -1.27
CLK1-212ENST00000482590 NEDD9Q14511 834 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 SMC1AQ14683 1233 aaKnown RBP7.09□□□□□ -1.27
CLK1-212ENST00000482590 MEA1Q16626 185 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 TBR1Q16650 682 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 TRIM71Q2Q1W2 868 aaKnown RBP7.09□□□□□ -1.27
CLK1-212ENST00000482590 FAM209BQ5JX69 171 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 BROXQ5VW32 411 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 BTBD8Q5XKL5 378 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 ZNF449Q6P9G9 518 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 ENOSF1Q7L5Y1 443 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 SERINC5Q86VE9 423 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 C1orf210Q8IVY1 113 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 CMIPQ8IY22 773 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 NRSN1Q8IZ57 195 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 CACNA2D3Q8IZS8 1091 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 AMER2Q8N7J2 671 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 DBF4BQ8NFT6 615 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 CTCFLQ8NI51 663 aaPredicted RBP7.09□□□□□ -1.27
CLK1-212ENST00000482590 IL17DQ8TAD2 202 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 LMBR1Q8WVP7 490 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 PIBF1Q8WXW3 757 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 PHKBQ93100 1093 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 MVB12AQ96EY5 273 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 SPAG5Q96R06 1193 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 IL25Q9H293 177 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 IKZF4Q9H2S9 585 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 RIOX1Q9H6W3 641 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 VPS45Q9NRW7 570 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 SEC63Q9UGP8 760 aaKnown RBP7.09□□□□□ -1.27
CLK1-212ENST00000482590 GPR34Q9UPC5 381 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 NR2E1Q9Y466 385 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 INSL6Q9Y581 213 aa7.09□□□□□ -1.27
CLK1-212ENST00000482590 TRIM64A6NGJ6 449 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 TRIM64BA6NI03 449 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 A6NLC8 198 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 TRIM64CA6NLI5 447 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 RHPN2P1A8MT19 583 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 E7EWF7 191 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 DKC1O60832 514 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLK1-212ENST00000482590 SMIM10L2AP0DMW4 78 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 SMIM10L2BP0DMW5 78 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 GSPT1P15170 499 aaKnown RBP7.08□□□□□ -1.28
CLK1-212ENST00000482590 PTPN1P18031 435 aaKnown RBP7.08□□□□□ -1.28
CLK1-212ENST00000482590 MCM7P33993 719 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 MAN2A2P49641 1150 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 MECP2P51608 486 aaKnown RBP7.08□□□□□ -1.28
CLK1-212ENST00000482590 DCAF7P61962 342 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 SP2Q02086 613 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 GUCY1A3Q02108 690 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 SP4Q02446 784 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 NFYCQ13952 458 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 GPNMBQ14956 572 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 TCTN1Q2MV58 587 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 UTP14CQ5TAP6 766 aaKnown RBP7.08□□□□□ -1.28
CLK1-212ENST00000482590 METTL7BQ6UX53 244 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLK1-212ENST00000482590 CAMKK1Q8N5S9 505 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 CHST14Q8NCH0 376 aa7.08□□□□□ -1.28
CLK1-212ENST00000482590 IPCEF1Q8WWN9 437 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms