RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ZIM3Q96PE6 472 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 GPR20Q99678 358 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 ACO2Q99798 780 aaKnown RBP8.08□□□□□ -1.12
SNX13-208ENST00000482558 SH2D3AQ9BRG2 576 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 TCHPQ9BT92 498 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 MIS12Q9H081 205 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 CNOT10Q9H9A5 744 aaKnown RBP8.08□□□□□ -1.12
SNX13-208ENST00000482558 VTA1Q9NP79 307 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 PARVAQ9NVD7 372 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 PRMT7Q9NVM4 692 aaPredicted RBP8.08□□□□□ -1.12
SNX13-208ENST00000482558 ERAP1Q9NZ08 941 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 FNIP2Q9P278 1114 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 AMACRQ9UHK6 382 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 PCDHB4Q9Y5E5 795 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 CNTNAP2Q9UHC6 1331 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 FAM86C2PA6NEL3 165 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 TTI1O43156 1089 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 B4GALT4O60513 344 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 MSCO60682 206 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 PROSCO94903 275 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 GAS8O95995 478 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 ASS1P00966 412 aaKnown RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 CST3P01034 146 aaPredicted RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 PRKCBP05771 671 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 NUDT17P0C025 328 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 P4HA1P13674 534 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 ITIH2P19823 946 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 ACO1P21399 889 aaKnown RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 TMOD1P28289 359 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 POLR2BP30876 1174 aaKnown RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 ATICP31939 592 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 RDXP35241 583 aaKnown RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 HSD17B3P37058 310 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 CD96P40200 585 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 ADCYAP1R1P41586 468 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 GCLCP48506 637 aaPredicted RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 OXCT1P55809 520 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 NLRP11P59045 1033 aaKnown RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 NOP14P78316 857 aaKnown RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 LAMTOR4Q0VGL1 99 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 CALCOCO2Q13137 446 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 DCAF12L1Q5VU92 463 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 PLEKHA7Q6IQ23 1121 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 PGM2L1Q6PCE3 622 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 CCDC137Q6PK04 289 aaKnown RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 MPZL3Q6UWV2 235 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 CRELD2Q6UXH1 353 aaPredicted RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 B4GALNT4Q76KP1 1039 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 TRMT1LQ7Z2T5 733 aaKnown RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 TMC3Q7Z5M5 1100 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 PALB2Q86YC2 1186 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 RHOT1Q8IXI2 618 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 GSPT2Q8IYD1 628 aaKnown RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 TMEM35BQ8NCS4 154 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 ALG3Q92685 438 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 KAT5Q92993 513 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 ANKRD36BP1Q96IX9 119 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 RBM41Q96IZ5 413 aaKnown RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 GDAP1L1Q96MZ0 367 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 SPATA33Q96N06 139 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 TAAR9Q96RI9 348 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 SLC9A7Q96T83 725 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 PCYT2Q99447 389 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 TMEM109Q9BVC6 243 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 FRMD8P1Q9BZ68 369 aaPredicted RBP8.07□□□□□ -1.12
SNX13-208ENST00000482558 FOXQ1Q9C009 403 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 DNAI2Q9GZS0 605 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 RNF38Q9H0F5 515 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 MYLK2Q9H1R3 596 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 FZD8Q9H461 694 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 GOLPH3Q9H4A6 298 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 RSAD1Q9HA92 442 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 TMBIM4Q9HC24 238 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 RRN3Q9NYV6 651 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 ADAM22Q9P0K1 906 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 WHRNQ9P202 907 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 ANAPC7Q9UJX3 599 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 ACAD8Q9UKU7 415 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 TNFSF13BQ9Y275 285 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 SNX11Q9Y5W9 270 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 LCTP09848 1927 aa8.07□□□□□ -1.12
SNX13-208ENST00000482558 ZNF503-AS2A6NEH8 195 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 EIF3HO15372 352 aaKnown RBP eCLIP8.06□□□□□ -1.12
SNX13-208ENST00000482558 DAPK3O43293 454 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 AP1G1O43747 822 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 CNMDO75829 334 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 DDNO94850 711 aaPredicted RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 FKBP9O95302 570 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 VNN1O95497 513 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 CNOT4O95628 575 aaKnown RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 PAEPP09466 180 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 TMEM191BP0C7N4 346 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 ZNF865P0CJ78 1059 aaPredicted RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 MCF2P10911 925 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 NCAM1P13591 858 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 ITGA4P13612 1032 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 NR1D1P20393 614 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 PROZP22891 400 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 CFPP27918 469 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms