RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 CD6P30203 668 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 SGSHP51688 502 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 ENPP2Q13822 863 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 MS4A13Q5J8X5 152 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 METTL3Q86U44 580 aaKnown RBP20.62■□□□□ 0.89
MSH5-215ENST00000482280 LGI2Q8N0V4 545 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 DEFB106AQ8N104 65 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.62■□□□□ 0.89
MSH5-215ENST00000482280 FIBINQ8TAL6 211 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 CYB5D2Q8WUJ1 264 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 SLC39A13Q96H72 371 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 PCMTD1Q96MG8 357 aaPredicted RBP20.62■□□□□ 0.89
MSH5-215ENST00000482280 HSPA12BQ96MM6 686 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 NUCKS1Q9H1E3 243 aaKnown RBP20.62■□□□□ 0.89
MSH5-215ENST00000482280 SLC6A17Q9H1V8 727 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 VPS16Q9H269 839 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 FBRSQ9HAH7 460 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 RXFP3Q9NSD7 469 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 EVLQ9UI08 416 aaPredicted RBP20.62■□□□□ 0.89
MSH5-215ENST00000482280 FHOD1Q9Y613 1164 aa20.62■□□□□ 0.89
MSH5-215ENST00000482280 ATXN2Q99700 1313 aaKnown RBP20.61■□□□□ 0.89
MSH5-215ENST00000482280 LNP1A1A4G5 178 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 MEI4A8MW99 385 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 GRAP2O75791 330 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 PNMA6AP0CW24 399 aaPredicted RBP20.61■□□□□ 0.89
MSH5-215ENST00000482280 UCHL3P15374 230 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 GNSP15586 552 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 CLCN1P35523 988 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 GFPT1Q06210 699 aaPredicted RBP20.61■□□□□ 0.89
MSH5-215ENST00000482280 STX1AQ16623 288 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 DUOXA1Q1HG43 343 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 WDR45BQ5MNZ6 344 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 RABGAP1LQ5R372 815 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 RNF219Q5W0B1 726 aaPredicted RBP20.61■□□□□ 0.89
MSH5-215ENST00000482280 RAP1GAP2Q684P5 730 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 TMEM215Q68D42 235 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 NADSYN1Q6IA69 706 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 FAM183BPQ6ZVS7 135 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 SND1Q7KZF4 910 aaKnown RBP eCLIP20.61■□□□□ 0.89
MSH5-215ENST00000482280 OR2T3Q8NH03 318 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 SUSD2Q9UGT4 822 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 SUN2Q9UH99 717 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 AJAP1Q9UKB5 411 aaPredicted RBP20.61■□□□□ 0.89
MSH5-215ENST00000482280 STAP1Q9ULZ2 295 aa20.61■□□□□ 0.89
MSH5-215ENST00000482280 C4orf47A7E2U8 309 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 KCNU1A8MYU2 1149 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 PATE3B3GLJ2 98 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 LUC7L3O95232 432 aaKnown RBP20.6■□□□□ 0.89
MSH5-215ENST00000482280 ASLP04424 464 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 CYP11B1P15538 503 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 CDK11BP21127 795 aaKnown RBP20.6■□□□□ 0.89
MSH5-215ENST00000482280 TACR2P21452 398 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 ITPKAP23677 461 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 CD70P32970 193 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 RPS24P62847 133 aaKnown RBP20.6■□□□□ 0.89
MSH5-215ENST00000482280 IRX4P78413 519 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 SLC6A3Q01959 620 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 NME3Q13232 169 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 TAF5Q15542 800 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 TTC39BQ5VTQ0 682 aaPredicted RBP20.6■□□□□ 0.89
MSH5-215ENST00000482280 LRSAM1Q6UWE0 723 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 ADIPOR2Q86V24 386 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 CACUL1Q86Y37 369 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 CFAP52Q8N1V2 620 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 WDTC1Q8N5D0 677 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 GPT2Q8TD30 523 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 PRICKLE1Q96MT3 831 aaPredicted RBP20.6■□□□□ 0.89
MSH5-215ENST00000482280 PPP1R9BQ96SB3 815 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 NUP58Q9BVL2 599 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 STK33Q9BYT3 514 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 MKRN2Q9H000 416 aaKnown RBP20.6■□□□□ 0.89
MSH5-215ENST00000482280 CD248Q9HCU0 757 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 PLCB1Q9NQ66 1216 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 ITM2CQ9NQX7 267 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 RRN3Q9NYV6 651 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 KIAA1522Q9P206 1035 aaPredicted RBP20.6■□□□□ 0.89
MSH5-215ENST00000482280 PILRBQ9UKJ0 227 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 PAXBP1Q9Y5B6 917 aa20.6■□□□□ 0.89
MSH5-215ENST00000482280 THADAQ6YHU6 1953 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 ERBB2P04626 1255 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 HLA-EP13747 358 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 NOS2P35228 1153 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 NNMTP40261 264 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 OXCT1P55809 520 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 KCNMA1Q12791 1236 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 TAF3Q5VWG9 929 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 ERICH1Q86X53 443 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 TOE1Q96GM8 510 aaKnown RBP20.59■□□□□ 0.89
MSH5-215ENST00000482280 SLC2A13Q96QE2 648 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 SPAG5Q96R06 1193 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 TMEM51Q9NW97 253 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 SLC6A14Q9UN76 642 aa20.59■□□□□ 0.89
MSH5-215ENST00000482280 RNASEH1O60930 286 aaKnown RBP20.58■□□□□ 0.89
MSH5-215ENST00000482280 DAB1O75553 588 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 LSM8O95777 96 aaKnown RBP20.58■□□□□ 0.89
MSH5-215ENST00000482280 DNTTP04053 509 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 MAPK8P45983 427 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 TPMTP51580 245 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 RNASE9P60153 205 aaKnown RBP20.58■□□□□ 0.89
MSH5-215ENST00000482280 MYL5Q02045 173 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms