RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CREB5Q02930 508 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 NME3Q13232 169 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 KLHL40Q2TBA0 621 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 FUT11Q495W5 492 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 SPDYCQ5MJ68 293 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 PLA2G2CQ5R387 149 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 FAM102AQ5T9C2 384 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-213ENST00000482192 TTC39BQ5VTQ0 682 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-213ENST00000482192 NAA35Q5VZE5 725 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 RAP1GAP2Q684P5 730 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 CHST9Q7L1S5 443 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 LPCAT2Q7L5N7 544 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 CHSY1Q86X52 802 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 DHX40Q8IX18 779 aaKnown RBP12.31□□□□□ -0.44
HMGN1-213ENST00000482192 LGI2Q8N0V4 545 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 CFAP52Q8N1V2 620 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 C12orf50Q8NA57 414 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-213ENST00000482192 FIBINQ8TAL6 211 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 SLC20A1Q8WUM9 679 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 SORCS1Q8WY21 1168 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 MRGPRX1Q96LB2 322 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 VPS45Q9NRW7 570 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 TMEM51Q9NW97 253 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.31□□□□□ -0.44
HMGN1-213ENST00000482192 COX16Q9P0S2 106 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 CDV3Q9UKY7 258 aaKnown RBP12.31□□□□□ -0.44
HMGN1-213ENST00000482192 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.31□□□□□ -0.44
HMGN1-213ENST00000482192 GVINP1Q7Z2Y8 2422 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 ATG2BQ96BY7 2078 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 BCLAF3A2AJT9 711 aaKnown RBP12.3□□□□□ -0.44
HMGN1-213ENST00000482192 M0QYT0 321 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 LUC7L3O95232 432 aaKnown RBP12.3□□□□□ -0.44
HMGN1-213ENST00000482192 EPHX1P07099 455 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 DLDP09622 509 aaKnown RBP12.3□□□□□ -0.44
HMGN1-213ENST00000482192 ZNF806P0C7X5 589 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 POLR2EP19388 210 aaKnown RBP12.3□□□□□ -0.44
HMGN1-213ENST00000482192 PTMSP20962 102 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 PRKCHP24723 683 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 CD70P32970 193 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 ZNF165P49910 485 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 RNASE9P60153 205 aaKnown RBP12.3□□□□□ -0.44
HMGN1-213ENST00000482192 PUM1Q14671 1186 aaKnown RBP eCLIP12.3□□□□□ -0.443e-25■□□□□ 8.5
HMGN1-213ENST00000482192 CCDC6Q16204 474 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 RSPO4Q2I0M5 234 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-213ENST00000482192 FNDC3BQ53EP0 1204 aaKnown RBP12.3□□□□□ -0.44
HMGN1-213ENST00000482192 MBLAC2Q68D91 279 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 SLC36A4Q6YBV0 504 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 TRIM72Q6ZMU5 477 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 SND1Q7KZF4 910 aaKnown RBP eCLIP12.3□□□□□ -0.44
HMGN1-213ENST00000482192 XYLT1Q86Y38 959 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 CARNMT1Q8N4J0 409 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 FRMD1Q8N878 549 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 WFDC5Q8TCV5 224 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 NETO1Q8TDF5 533 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 CPA5Q8WXQ8 436 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 ERLEC1Q96DZ1 483 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 MYEOVQ96EZ4 313 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 NPY6RQ99463 290 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 PRMT1Q99873 361 aaKnown RBP12.3□□□□□ -0.44
HMGN1-213ENST00000482192 TMEM245Q9H330 911 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 PRDM16Q9HAZ2 1276 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 DLL3Q9NYJ7 618 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 MBD1Q9UIS9 605 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-213ENST00000482192 PAXBP1Q9Y5B6 917 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 FAM186AA6NE01 2351 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 GPR179Q6PRD1 2367 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 EML5Q05BV3 1969 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 VPS13AQ96RL7 3174 aa12.3□□□□□ -0.44
HMGN1-213ENST00000482192 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-213ENST00000482192 FAM170AA1A519 330 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 H0Y626 953 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 AP5Z1O43299 807 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 CAVIN2O95810 425 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 F9P00740 461 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 CYP1A1P04798 512 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-213ENST00000482192 CHRNB2P17787 502 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 MMP8P22894 467 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 DHPSP49366 369 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-213ENST00000482192 SULT1E1P49888 294 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 FMO1Q01740 532 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 RPL6Q02878 288 aaKnown RBP12.29□□□□□ -0.44
HMGN1-213ENST00000482192 LMAN2Q12907 356 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 PTPRNQ16849 979 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 SLC25A52Q3SY17 297 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 AASDHQ4L235 1098 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-213ENST00000482192 C2CD6Q53TS8 623 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 RABGAP1LQ5R372 815 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 OTUD1Q5VV17 481 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-213ENST00000482192 KIAA1324Q6UXG2 1013 aaKnown RBP12.29□□□□□ -0.44
HMGN1-213ENST00000482192 MMS22LQ6ZRQ5 1243 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 ARCQ7LC44 396 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 CYP2U1Q7Z449 544 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 METTL3Q86U44 580 aaKnown RBP12.29□□□□□ -0.44
HMGN1-213ENST00000482192 TMEFF1Q8IYR6 380 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 CYB5D2Q8WUJ1 264 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 NT5C3BQ969T7 300 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 PGAP3Q96FM1 320 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-213ENST00000482192 LMLNQ96KR4 655 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 MKRN2Q9H000 416 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms