RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 SIM2Q14190 667 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 ZNF268Q14587 947 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 ITPRIPL2Q3MIP1 535 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 FBXO43Q4G163 708 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 ZC2HC1CQ53FD0 456 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 RRAGBQ5VZM2 374 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 WSCD1Q658N2 575 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 CRELD2Q6UXH1 353 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 DPH6Q7L8W6 267 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 LRRTM3Q86VH5 581 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 CMTM8Q8IZV2 173 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 LRRC52Q8N7C0 313 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 LINC01356Q8N9X3 169 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 OR10T2Q8NGX3 314 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 LRRC15Q8TF66 581 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 DDX1Q92499 740 aaKnown RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 LOXL4Q96JB6 756 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 LRRC3BQ96PB8 259 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 ACCSQ96QU6 501 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 TMEM209Q96SK2 561 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 SEPT5Q99719 369 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 SLC46A2Q9BY10 475 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 MKRN2Q9H000 416 aaKnown RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 TMEM206Q9H813 350 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 MRPL44Q9H9J2 332 aaKnown RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 LUC7LQ9NQ29 371 aaKnown RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 OLFML3Q9NRN5 406 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 TDP1Q9NUW8 608 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 GDAP2Q9NXN4 497 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 GTSE1Q9NYZ3 720 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 ITGA11Q9UKX5 1188 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 MED19A0JLT2 244 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 SLC38A8A6NNN8 435 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 K7ESF4 209 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 TRDMT1O14717 391 aaKnown RBP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 HUS1O60921 280 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 ZNF205O95201 554 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 CENPBP07199 599 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 FAM163BP0C2L3 166 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 HMGA1P17096 107 aaKnown RBP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 PFKLP17858 780 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 ATF6P18850 670 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 PCSK1P29120 753 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 ADSSP30520 456 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 CTSKP43235 329 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 LHX1P48742 406 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 RPL10AP62906 217 aaKnown RBP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 MYL7Q01449 175 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 SATB1Q01826 763 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 GRIN1Q05586 938 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 GRSF1Q12849 480 aaKnown RBP eCLIP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 BFSP1Q12934 665 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 CUL4AQ13619 759 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 PON2Q15165 354 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 PDGFRLQ15198 375 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 SURF1Q15526 300 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 MAPRE1Q15691 268 aaKnown RBP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 CSRP2Q16527 193 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 CFAP221Q4G0U5 840 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 STXBP5Q5T5C0 1151 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 L1TD1Q5T7N2 865 aaKnown RBP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 CC2D1AQ6P1N0 951 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 CCDC73Q6ZRK6 1079 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 GK5Q6ZS86 529 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 MON1AQ86VX9 555 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 WDR5BQ86VZ2 330 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 SFR1Q86XK3 245 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 BRSK2Q8IWQ3 736 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 EFCAB13Q8IY85 973 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 CAMKK1Q8N5S9 505 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 TTC9BQ8N6N2 239 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 KIAA1958Q8N8K9 716 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 CCDC26Q8TAB7 109 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 MRPS31Q92665 395 aaKnown RBP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 DNAJC19Q96DA6 116 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 RSPRY1Q96DX4 576 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 TRMT2BQ96GJ1 504 aaKnown RBP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 FUBP3Q96I24 572 aaKnown RBP eCLIP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 EPSTI1Q96J88 318 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 LRRC27Q9C0I9 530 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 TNFRSF12AQ9NP84 129 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 GKN1Q9NS71 199 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 AP5S1Q9NUS5 200 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 ACSL6Q9UKU0 697 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 USP18Q9UMW8 372 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 R3HCC1Q9Y3T6 440 aaKnown RBP6.91□□□□□ -1.3
LRCH3-216ENST00000481048 CEP192Q8TEP8 1941 aa6.91□□□□□ -1.3
LRCH3-216ENST00000481048 FRYLO94915 3013 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 FRMD3A2A2Y4 597 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 MYMKA6NI61 221 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 GABRDO14764 452 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 SLC30A4O14863 429 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 EXTL3O43909 919 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 SOAT2O75908 522 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 AKAP3O75969 853 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 PRAMEF12O95522 483 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 PDIA4P13667 645 aaKnown RBP6.9□□□□□ -1.3
LRCH3-216ENST00000481048 VAV1P15498 845 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 TCF3P15923 654 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms