RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 SATB1Q01826 763 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 CSTF1Q05048 431 aaKnown RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 EGR3Q06889 387 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 PPP3CAQ08209 521 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 SRSF5Q13243 272 aaKnown RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 ZNF77Q15935 545 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 WDR72Q3MJ13 1102 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 MDH1BQ5I0G3 518 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 SPOPLQ6IQ16 392 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 FSTL4Q6MZW2 842 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 SCARA5Q6ZMJ2 495 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 ZNF852Q6ZMS4 543 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 KRBA2Q6ZNG9 492 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 ITIH5Q86UX2 942 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 MON1AQ86VX9 555 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 SFTPA1Q8IWL2 248 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 SCN4BQ8IWT1 228 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 DCP1BQ8IZD4 617 aaKnown RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 ADSSL1Q8N142 457 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 FSIP1Q8NA03 581 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 ZBTB44Q8NCP5 570 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 ZMIZ2Q8NF64 920 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 ENGASEQ8NFI3 743 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 MYCBPAPQ8TBZ2 947 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 ENOX1Q8TC92 643 aaKnown RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 CACTINQ8WUQ7 758 aaKnown RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 TMEM174Q8WUU8 243 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 DEPDC1BQ8WUY9 529 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 FAM3CQ92520 227 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 ERCC4Q92889 916 aaPredicted RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 NKD2Q969F2 451 aaPredicted RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 WBP2Q969T9 261 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 EEF2KMTQ96G04 330 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 TRMT2BQ96GJ1 504 aaKnown RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 SHDQ96IW2 340 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 ANKRD36BP1Q96IX9 119 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 TWNKQ96RR1 684 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 LRRC27Q9C0I9 530 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 TGIF2Q9GZN2 237 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 MKRN2Q9H000 416 aaKnown RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 TASP1Q9H6P5 420 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 CCSER2Q9H7U1 834 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 LMAN1LQ9HAT1 526 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 APOBEC3GQ9HC16 384 aaKnown RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 GKN1Q9NS71 199 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 SPATA6Q9NWH7 488 aaPredicted RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 CFAP45Q9UL16 551 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 MAGED2Q9UNF1 606 aaPredicted RBP5.9□□□□□ -1.46
LINC02040-201ENST00000481004 CTNND2Q9UQB3 1225 aa5.9□□□□□ -1.46
LINC02040-201ENST00000481004 PTPRZ1P23471 2315 aaPredicted RBP5.9□□□□□ -1.47
LINC02040-201ENST00000481004 MYH10P35580 1976 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 A0A1W2PQ27 194 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 A0A1W2PQ64 194 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 A0A1W2PQD8 194 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 F8VP50 259 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 EXOC3O60645 756 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 TACC1O75410 805 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 AKAP3O75969 853 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 BEST1O76090 585 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 RHOBTB3O94955 611 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 OLFM2O95897 454 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 TRIM49P0CI25 452 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 TRIM49CP0CI26 452 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 RAC2P15153 192 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 PTPN1P18031 435 aaKnown RBP5.89□□□□□ -1.47
LINC02040-201ENST00000481004 TNNI1P19237 187 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 TGM1P22735 817 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 CDC25CP30307 473 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 GDNFP39905 211 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 SYKP43405 635 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 LHX1P48742 406 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 PMS1P54277 932 aaKnown RBP5.89□□□□□ -1.47
LINC02040-201ENST00000481004 SNRPFP62306 86 aaKnown RBP5.89□□□□□ -1.47
LINC02040-201ENST00000481004 KRT85P78386 507 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 MYL7Q01449 175 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 SMARCB1Q12824 385 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 PNOCQ13519 176 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 VEPH1Q14D04 833 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 PON2Q15165 354 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 NFE2Q16621 373 aaPredicted RBP5.89□□□□□ -1.47
LINC02040-201ENST00000481004 ZACNQ401N2 412 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 STXBP4Q6ZWJ1 553 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 DPH6Q7L8W6 267 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 SPATA2LQ8IUW3 424 aaPredicted RBP5.89□□□□□ -1.47
LINC02040-201ENST00000481004 CEP57L1Q8IYX8 460 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 FUKQ8N0W3 1084 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 TAB3Q8N5C8 712 aaPredicted RBP5.89□□□□□ -1.47
LINC02040-201ENST00000481004 CELF5Q8N6W0 485 aaKnown RBP5.89□□□□□ -1.47
LINC02040-201ENST00000481004 ARL14EPQ8N8R7 260 aaPredicted RBP5.89□□□□□ -1.47
LINC02040-201ENST00000481004 SCAMP5Q8TAC9 235 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 SPATA18Q8TC71 538 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 BPIFB1Q8TDL5 484 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 FAM168AQ92567 244 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 P2RY11Q96G91 374 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 FUBP3Q96I24 572 aaKnown RBP eCLIP5.89□□□□□ -1.47
LINC02040-201ENST00000481004 SLC6A18Q96N87 628 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 KCNK16Q96T55 309 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 MMS19Q96T76 1030 aa5.89□□□□□ -1.47
LINC02040-201ENST00000481004 TTLL2Q9BWV7 592 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms