RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 KLF16Q9BXK1 252 aaPredicted RBP9.43□□□□□ -0.9
VCP-206ENST00000480327 TPSD1Q9BZJ3 242 aa9.43□□□□□ -0.9
VCP-206ENST00000480327 POPDC2Q9HBU9 364 aa9.43□□□□□ -0.9
VCP-206ENST00000480327 MARCH2Q9P0N8 246 aa9.43□□□□□ -0.9
VCP-206ENST00000480327 COX16Q9P0S2 106 aa9.43□□□□□ -0.9
VCP-206ENST00000480327 IMPACTQ9P2X3 320 aa9.43□□□□□ -0.9
VCP-206ENST00000480327 STRIP2Q9ULQ0 834 aa9.43□□□□□ -0.9
VCP-206ENST00000480327 ARHGAP26Q9UNA1 814 aa9.43□□□□□ -0.9
VCP-206ENST00000480327 LAMA5O15230 3695 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 PKD1L2Q7Z442 2459 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 CACNA1EQ15878 2313 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 SSU72P8A0A1W2PR75 194 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 SOWAHDA6NJG2 315 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 C4orf47A7E2U8 309 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 CDX4O14627 284 aaPredicted RBP9.42□□□□□ -0.9
VCP-206ENST00000480327 HSF2BPO75031 334 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 DAB1O75553 588 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 APBB3O95704 486 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 GZMAP12544 262 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 PFKLP17858 780 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 FLT3P36888 993 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 SLC6A11P48066 632 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 IFNAR2P48551 515 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 SEC13P55735 322 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 SLC7A9P82251 487 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 CDK17Q00537 523 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 CREB5Q02930 508 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 SLC18A3Q16572 532 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 ASTE1Q2TB18 679 aaPredicted RBP9.42□□□□□ -0.9
VCP-206ENST00000480327 FBXO43Q4G163 708 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 PMS2CLQ68D20 193 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 RNF43Q68DV7 783 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 TRNP1Q6NT89 227 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 DNAJC24Q6P3W2 148 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 SLC26A9Q7LBE3 791 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 TAC4Q86UU9 113 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 C12orf40Q86WS4 652 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 FRMD1Q8N878 549 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 JOSD2Q8TAC2 188 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 DQX1Q8TE96 717 aaKnown RBP9.42□□□□□ -0.9
VCP-206ENST00000480327 ATP2A3Q93084 1043 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 ZFRQ96KR1 1074 aaKnown RBP9.42□□□□□ -0.9
VCP-206ENST00000480327 SLC2A13Q96QE2 648 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 CDK5RAP1Q96SZ6 601 aaKnown RBP9.42□□□□□ -0.9
VCP-206ENST00000480327 EDEM2Q9BV94 578 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 PACSIN1Q9BY11 444 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 THAP2Q9H0W7 228 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 ISCUQ9H1K1 167 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 FAM204AQ9H8W3 233 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 OLA1Q9NTK5 396 aaKnown RBP9.42□□□□□ -0.9
VCP-206ENST00000480327 ASNSD1Q9NWL6 643 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.42□□□□□ -0.9
VCP-206ENST00000480327 WDR35Q9P2L0 1181 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 CNOT8Q9UFF9 292 aaKnown RBP9.42□□□□□ -0.9
VCP-206ENST00000480327 SH3BP1Q9Y3L3 701 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 BAHCC1Q9P281 2608 aa9.42□□□□□ -0.9
VCP-206ENST00000480327 C1QTNF9BB2RNN3 333 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 TRUB2O95900 331 aaKnown RBP9.41□□□□□ -0.9
VCP-206ENST00000480327 CYP17A1P05093 508 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 GLI1P08151 1106 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 C1QTNF9P0C862 333 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 KRT3P12035 628 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 TFE3P19532 575 aaPredicted RBP9.41□□□□□ -0.9
VCP-206ENST00000480327 SPINK2P20155 84 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 RFC1P35251 1148 aaPredicted RBP9.41□□□□□ -0.9
VCP-206ENST00000480327 MATKP42679 507 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 SULT1E1P49888 294 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 DGKEP52429 567 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 GALCP54803 685 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 TBX4P57082 545 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 ATP11AP98196 1134 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 AMPD2Q01433 879 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 NME3Q13232 169 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 C2orf27AQ580R0 203 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 KLHDC10Q6PID8 442 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 PHTF2Q8N3S3 785 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 ZNF276Q8N554 614 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 CCDC33Q8N5R6 958 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 C3orf20Q8ND61 904 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 MDGA1Q8NFP4 955 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 RXFP2Q8WXD0 754 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 ANP32BQ92688 251 aaKnown RBP9.41□□□□□ -0.9
VCP-206ENST00000480327 RNF34Q969K3 372 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 CFAP57Q96MR6 1250 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 MCEEQ96PE7 176 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 TBCBQ99426 244 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 BAG1Q99933 345 aaPredicted RBP9.41□□□□□ -0.9
VCP-206ENST00000480327 TRIM62Q9BVG3 475 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 ZDHHC4Q9NPG8 344 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 TMEM59LQ9UK28 342 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 HCN2Q9UL51 889 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 MMP17Q9ULZ9 603 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 NENFQ9UMX5 172 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 PLXNB3Q9ULL4 1909 aa9.41□□□□□ -0.9
VCP-206ENST00000480327 TCRBV5S1A1TA0A578 114 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 ANKRD62A6NC57 917 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 SIGLEC16A6NMB1 481 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 M0QYT0 321 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 SGK1O00141 431 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 STC2O76061 302 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms