RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 TMEM209Q96SK2 561 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 KRTAP4-12Q9BQ66 201 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 SLC46A2Q9BY10 475 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 B3GNT5Q9BYG0 378 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 SDCBP2Q9H190 292 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 TNKS2Q9H2K2 1166 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 SMYD3Q9H7B4 428 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ZNF334Q9HCZ1 680 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-213ENST00000480102 PLCB1Q9NQ66 1216 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CNGB3Q9NQW8 809 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ARHGEF3Q9NR81 526 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CISHQ9NSE2 258 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 TDP1Q9NUW8 608 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 HCFC1R1Q9NWW0 138 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 TBC1D14Q9P2M4 693 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 APEX2Q9UBZ4 518 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 CDH22Q9UJ99 828 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 FBXO4Q9UKT5 387 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 MAPK8IP1Q9UQF2 711 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 ZNF510Q9Y2H8 683 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 NME7Q9Y5B8 376 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 TRIOO75962 3097 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 KIAA1671Q9BY89 1806 aa5.16□□□□□ -1.58
PTCD3-213ENST00000480102 PLXNA4Q9HCM2 1894 aa5.15□□□□□ -1.58
PTCD3-213ENST00000480102 CACNA1HO95180 2353 aa5.15□□□□□ -1.58
PTCD3-213ENST00000480102 MYO9BQ13459 2157 aa5.15□□□□□ -1.58
PTCD3-213ENST00000480102 TRAV19A0A0A6YYK7 116 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 E2F8A0AVK6 867 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 SHISA7A6NL88 538 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 HEPACAM2A8MVW5 462 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 CHURC1-FNTBB4DL54 471 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 HHLA1C9JL84 531 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 O00370 1275 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 TRDMT1O14717 391 aaKnown RBP5.15□□□□□ -1.59
PTCD3-213ENST00000480102 XPO1O14980 1071 aaKnown RBP5.15□□□□□ -1.59
PTCD3-213ENST00000480102 FBXO21O94952 628 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 PGRP06401 933 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 ASGR2P07307 311 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 GLI1P08151 1106 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 WEE2P0C1S8 567 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 ZNF18P17022 549 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 BDNFP23560 247 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 CDH8P55286 799 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 SNX16P57768 344 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 BPIFB4P59827 614 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 GPC5P78333 572 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 LMNB2Q03252 620 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 BNIP3Q12983 259 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 PWP1Q13610 501 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 TEAD2Q15562 447 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 MLF2Q15773 248 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-213ENST00000480102 ZNF77Q15935 545 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 EXOC3L4Q17RC7 722 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 DPCR1Q3MIW9 517 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 CCDC40Q4G0X9 1142 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 MDH1BQ5I0G3 518 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 DGKKQ5KSL6 1271 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 HECTD3Q5T447 861 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 CCDC183Q5T5S1 534 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 GPR158Q5T848 1215 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 PRAMEF13Q5VWM6 474 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 CWF19L1Q69YN2 538 aaKnown RBP5.15□□□□□ -1.59
PTCD3-213ENST00000480102 DPY19L2P1Q6NXN4 242 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 VITQ6UXI7 678 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 GBP6Q6ZN66 633 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 CLEC20AQ6ZU45 233 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 HTR3DQ70Z44 454 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 ZNF677Q86XU0 584 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 ZDHHC17Q8IUH5 632 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 SPACA3Q8IXA5 215 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 MRPL41Q8IXM3 137 aaKnown RBP5.15□□□□□ -1.59
PTCD3-213ENST00000480102 TTC9BQ8N6N2 239 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 ZNF557Q8N988 423 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-213ENST00000480102 SLC4A11Q8NBS3 891 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 ZMIZ2Q8NF64 920 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 PJA1Q8NG27 643 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 SLC35F5Q8WV83 523 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 SHC3Q92529 594 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 SEMA4DQ92854 862 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 AZIN2Q96A70 460 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 IQCDQ96DY2 449 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 TCEAL4Q96EI5 215 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 CNOT6LQ96LI5 555 aaKnown RBP5.15□□□□□ -1.59
PTCD3-213ENST00000480102 ZSWIM3Q96MP5 696 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 TMEM74Q96NL1 305 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 MIPEPQ99797 713 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 PI4K2AQ9BTU6 479 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 RSRP1Q9BUV0 290 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 APOL5Q9BWW9 433 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 SRRTQ9BXP5 876 aaKnown RBP5.15□□□□□ -1.59
PTCD3-213ENST00000480102 ZNF518BQ9C0D4 1074 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 NAT10Q9H0A0 1025 aaKnown RBP5.15□□□□□ -1.59
PTCD3-213ENST00000480102 LHX5Q9H2C1 402 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 NDST4Q9H3R1 872 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 BRD9Q9H8M2 597 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 LTB4R2Q9NPC1 389 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 TLR8Q9NR97 1041 aaKnown RBP5.15□□□□□ -1.59
PTCD3-213ENST00000480102 OLA1Q9NTK5 396 aaKnown RBP5.15□□□□□ -1.59
PTCD3-213ENST00000480102 ASNSD1Q9NWL6 643 aa5.15□□□□□ -1.59
PTCD3-213ENST00000480102 STOML2Q9UJZ1 356 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms