RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 VCAM1P19320 739 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CHRM3P20309 590 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 AXLP30530 894 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 GABRB2P47870 512 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CCR3P51677 355 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 NME5P56597 212 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM153CQ494X1 144 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SPDYE7PQ495Y7 208 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ZNF618Q5T7W0 954 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 NEPROQ6NW34 567 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 RFX8Q6ZV50 586 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 STK32CQ86UX6 486 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ELMOD1Q8N336 334 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 DNERQ8NFT8 737 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 STAG3L4Q8TBR4 150 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 UBE2E3Q969T4 207 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 MKL1Q969V6 931 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 MPP4Q96JB8 637 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 DPY30Q9C005 99 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 TMEM134Q9H6X4 195 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SARS2Q9NP81 518 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 KCNMB3Q9NPA1 279 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 DAPK2Q9UIK4 370 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 RPS6KA6Q9UK32 745 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SPACA6W5XKT8 324 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 IRGMA1A4Y4 181 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 QSOX1O00391 747 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 BMP10O95393 424 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SGPL1O95470 568 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 PROCP04070 461 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ZNF7P17097 686 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 TPP2P29144 1249 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 HTR7P34969 479 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 MAGEA10P43363 369 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CASP4P49662 377 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CASP7P55210 303 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 PSME3P61289 254 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 RPS6P62753 249 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 NME3Q13232 169 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ARHGEF7Q14155 803 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 FASTKQ14296 549 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ZNF846Q147U1 533 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CCDC85BQ15834 202 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 DALRD3Q5D0E6 543 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 TRIQKQ629K1 86 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM172AQ8WUF8 416 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ZDHHC15Q96MV8 337 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 PANX3Q96QZ0 392 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 RUSC1Q9BVN2 902 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 FHDC1Q9C0D6 1143 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ARMC7Q9H6L4 198 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 IARS2Q9NSE4 1012 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 PLK2Q9NYY3 685 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CRLS1Q9UJA2 301 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 STOML2Q9UJZ1 356 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 VANGL2Q9ULK5 521 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 FNDC3AQ9Y2H6 1198 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 C1orf232A0A0U1RR37 186 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 SNAP23O00161 211 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 PLK4O00444 970 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ECE2O60344 883 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 GLP2RO95838 553 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 SUPT20HL2P0C7V6 817 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 MYBL2P10244 700 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ITGA2P17301 1181 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 NUP62P37198 522 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 GTF2BQ00403 316 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ZACNQ401N2 412 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 EMC10Q5UCC4 262 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 METTL3Q86U44 580 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 TLK2Q86UE8 772 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 CENPLQ8N0S6 344 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 SYNE4Q8N205 404 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 PPP3R2Q96LZ3 170 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 GPR101Q96P66 508 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 EBNA1BP2Q99848 306 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 C17orf80Q9BSJ5 609 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 IDI2Q9BXS1 227 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 SPAG4Q9NPE6 437 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 TMEM9Q9P0T7 183 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 MCM8Q9UJA3 840 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 A0A087X1B8 175 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 CBX6O95503 412 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 POLR2EP19388 210 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 DPYSL3Q14195 570 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 RBBP7Q16576 425 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 RNF217Q8TC41 542 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 RASSF5Q8WWW0 418 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 MYDGFQ969H8 173 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 LENG9Q96B70 501 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 GORASP1Q9BQQ3 440 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ATP6V1HQ9UI12 483 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 MTF2Q9Y483 593 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 UMODL1Q5DID0 1318 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ZBTB39O15060 712 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 RAD17O75943 681 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 FKBP1AP62942 108 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 TSNQ15631 228 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 MARC1Q5VT66 337 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ANGEL2Q5VTE6 544 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms