RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 ZNF558Q96NG5 402 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 CCNL2Q96S94 520 aaPredicted RBP9.16□□□□□ -0.94
TTC3-216ENST00000479930 HAUS4Q9H6D7 363 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 LOXHD1Q8IVV2 1947 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 C19orf81C9J6K1 198 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 PMPCBO75439 489 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 LRPAP1P30533 357 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 IQCCQ4KMZ1 466 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 C9orf152Q5JTZ5 239 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 LPCAT1Q8NF37 534 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 CLIC6Q96NY7 704 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 ROGDIQ9GZN7 287 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 PLEKHA1Q9HB21 404 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 WASF2Q9Y6W5 498 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 NCOA1Q15788 1441 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 HSPA12AO43301 675 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 ACSL3O95573 720 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 KRT16P08779 473 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 PLA2G4BP0C869 781 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 HSF2Q03933 536 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 NOTUMQ6P988 496 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 HEATR4Q86WZ0 1026 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 TMEM121BQ9BXQ6 578 aaPredicted RBP9.16□□□□□ -0.94
TTC3-216ENST00000479930 SLC52A2Q9HAB3 445 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 ASAH2Q9NR71 780 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
TTC3-216ENST00000479930 VIPP01282 170 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 ACAT1P24752 427 aaKnown RBP9.15□□□□□ -0.94
TTC3-216ENST00000479930 ALDH3A2P51648 485 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 ADCY2Q08462 1091 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 PKN1Q16512 942 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 NEK5Q6P3R8 708 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 TMC5Q6UXY8 1006 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 MYCBPAPQ8TBZ2 947 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 TMEM143Q96AN5 459 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 EME1Q96AY2 570 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 CNOT6LQ96LI5 555 aaKnown RBP9.15□□□□□ -0.94
TTC3-216ENST00000479930 WASF3Q9UPY6 502 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 WBP11Q9Y2W2 641 aaKnown RBP9.15□□□□□ -0.94
TTC3-216ENST00000479930 ERBB4Q15303 1308 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 IGSF1Q8N6C5 1336 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 SGSM2O43147 1006 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 RTN2O75298 545 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 DNAJA1P31689 397 aaKnown RBP9.15□□□□□ -0.94
TTC3-216ENST00000479930 IZUMO2Q6UXV1 221 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 THAP5Q7Z6K1 395 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 MLKLQ8NB16 471 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.15□□□□□ -0.941e-8■■■■□ 24.7
TTC3-216ENST00000479930 PCDHA13Q9Y5I0 950 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 MANSC4A6NHS7 340 aaPredicted RBP9.15□□□□□ -0.94
TTC3-216ENST00000479930 H0Y858 1186 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 ALBP02768 609 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 NME5P56597 212 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 SP140Q13342 867 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 XRRA1Q6P2D8 792 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 DEF8Q6ZN54 512 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 TCEANCQ8N8B7 351 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 RFT1Q96AA3 541 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 LIN7AO14910 233 aaPredicted RBP9.15□□□□□ -0.94
TTC3-216ENST00000479930 CTIFO43310 598 aaKnown RBP9.15□□□□□ -0.94
TTC3-216ENST00000479930 RB1P06400 928 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 PRG2P13727 222 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 DEFA1P59665 94 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 DEFA3P59666 94 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 PKDCCQ504Y2 493 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 HFE2Q6ZVN8 426 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 PEX5LQ8IYB4 626 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 RABGEF1Q9UJ41 708 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 HCN2Q9UL51 889 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 NUP160Q12769 1436 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 CENPXA8MT69 81 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 SLC9A3R1O14745 358 aaPredicted RBP9.15□□□□□ -0.94
TTC3-216ENST00000479930 SCAMP3O14828 347 aaKnown RBP9.15□□□□□ -0.94
TTC3-216ENST00000479930 MYBL1P10243 752 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 MAPK14Q16539 360 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 NDUFA9Q16795 377 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 ABRAXAS1Q6UWZ7 409 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 MICU2Q8IYU8 434 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 ZNF713Q8N859 430 aaPredicted RBP9.15□□□□□ -0.94
TTC3-216ENST00000479930 COLGALT1Q8NBJ5 622 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 OR14C36Q8NHC7 312 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 HES7Q9BYE0 225 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 ABCB10Q9NRK6 738 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 DUSP12Q9UNI6 340 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 SYNJ2O15056 1496 aa9.15□□□□□ -0.94
TTC3-216ENST00000479930 GSTT2P0CG29 244 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 GSTT2BP0CG30 244 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 CD53P19397 219 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 NDUFA5Q16718 116 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 RPAINQ86UA6 219 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 MAGEC3Q8TD91 643 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 FAM172AQ8WUF8 416 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 EEF1AKMT1Q8WVE0 214 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 PRR11Q96HE9 360 aaPredicted RBP9.15□□□□□ -0.95
TTC3-216ENST00000479930 LGMNQ99538 433 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 RGS17Q9UGC6 210 aaPredicted RBP9.15□□□□□ -0.95
TTC3-216ENST00000479930 GRIN2DO15399 1336 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 TNKSO95271 1327 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 IGSF6O95976 241 aa9.15□□□□□ -0.95
TTC3-216ENST00000479930 PCCBP05166 539 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms