RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 RABGAP1LQ5R372 815 aa16.01■□□□□ 0.15
C9orf3-217ENST00000479161 C10orf76Q5T2E6 689 aa16.01■□□□□ 0.15
C9orf3-217ENST00000479161 PKN3Q6P5Z2 889 aa16.01■□□□□ 0.15
C9orf3-217ENST00000479161 FNIP1Q8TF40 1166 aa16.01■□□□□ 0.15
C9orf3-217ENST00000479161 UCMAQ8WVF2 138 aa16.01■□□□□ 0.15
C9orf3-217ENST00000479161 RXFP2Q8WXD0 754 aa16.01■□□□□ 0.15
C9orf3-217ENST00000479161 LMLNQ96KR4 655 aa16.01■□□□□ 0.15
C9orf3-217ENST00000479161 PPP1R9BQ96SB3 815 aa16.01■□□□□ 0.15
C9orf3-217ENST00000479161 SLC8A2Q9UPR5 921 aa16.01■□□□□ 0.15
C9orf3-217ENST00000479161 SPAG17Q6Q759 2223 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 USP34Q70CQ2 3546 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 IGLV3-10A0A075B6K4 115 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 GOLGA6L7A0A1B0GV03 622 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 A0A1B0GVM2 712 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 SSU72P8A0A1W2PR75 194 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 TCAF2A6NFQ2 919 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 PRRT4C9JH25 899 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 TBL1XO60907 577 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 PAGE1O75459 146 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 FTLP02792 175 aaPredicted RBP16■□□□□ 0.15
C9orf3-217ENST00000479161 RRM1P23921 792 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 HLA-FP30511 346 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 NTSR1P30989 418 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 AIF1P55008 147 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 KDSRQ06136 332 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 MAMLD1Q13495 774 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 AUHQ13825 339 aaKnown RBP16■□□□□ 0.15
C9orf3-217ENST00000479161 CRY1Q16526 586 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 C2orf27AQ580R0 203 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 DNAJC24Q6P3W2 148 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 RFWD3Q6PCD5 774 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 WDR59Q6PJI9 974 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 WDR5BQ86VZ2 330 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 LONP2Q86WA8 852 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 CCDC117Q8IWD4 279 aaPredicted RBP16■□□□□ 0.15
C9orf3-217ENST00000479161 AHI1Q8N157 1196 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 ZNF513Q8N8E2 541 aaPredicted RBP16■□□□□ 0.15
C9orf3-217ENST00000479161 KDM1BQ8NB78 822 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 CPLX3Q8WVH0 158 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 CFAP57Q96MR6 1250 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 PRICKLE1Q96MT3 831 aaPredicted RBP16■□□□□ 0.15
C9orf3-217ENST00000479161 GABRG3Q99928 467 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 NCAPGQ9BPX3 1015 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 CNPY3Q9BT09 278 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 TKTL2Q9H0I9 626 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 ELOVL2Q9NXB9 296 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 TAS2R14Q9NYV8 317 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 ADAMTS1Q9UHI8 967 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 XPO7Q9UIA9 1087 aaKnown RBP16■□□□□ 0.15
C9orf3-217ENST00000479161 HCN2Q9UL51 889 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 CKAP5Q14008 2032 aa16■□□□□ 0.15
C9orf3-217ENST00000479161 MYO15AQ9UKN7 3530 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 DRGXA6NNA5 263 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 TRIM24O15164 1050 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 TSPAN3O60637 253 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 LUC7L3O95232 432 aaKnown RBP15.99■□□□□ 0.15
C9orf3-217ENST00000479161 ADCY5O95622 1261 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 APBB3O95704 486 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 MOCS2O96007 188 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-217ENST00000479161 SKILP12757 684 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 DESP17661 470 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 TFE3P19532 575 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-217ENST00000479161 GPD1P21695 349 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 VASPP50552 380 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-217ENST00000479161 PLK1P53350 603 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 TBX2Q13207 712 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-217ENST00000479161 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-217ENST00000479161 ACAP1Q15027 740 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 GEN1Q17RS7 908 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 TSR1Q2NL82 804 aaKnown RBP15.99■□□□□ 0.15
C9orf3-217ENST00000479161 ARL13BQ3SXY8 428 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 TDRD12Q587J7 1177 aaKnown RBP15.99■□□□□ 0.15
C9orf3-217ENST00000479161 RAP1GAP2Q684P5 730 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 SDE2Q6IQ49 451 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 CHST9Q7L1S5 443 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 RASSF3Q86WH2 238 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 CHSY1Q86X52 802 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 CNGA4Q8IV77 575 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 LGI2Q8N0V4 545 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 EMC1Q8N766 993 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 JOSD2Q8TAC2 188 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 ATRIPQ8WXE1 791 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 BHMTQ93088 406 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 NTAN1Q96AB6 310 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 TTC17Q96AE7 1141 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 MRFAP1L1Q96HT8 127 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 TRIM5Q9C035 493 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 OSBPL2Q9H1P3 480 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 MRPL47Q9HD33 250 aaKnown RBP15.99■□□□□ 0.15
C9orf3-217ENST00000479161 KIAA1522Q9P206 1035 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-217ENST00000479161 ARHGAP20Q9P2F6 1191 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 THAP10Q9P2Z0 257 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-217ENST00000479161 CLEC4EQ9ULY5 219 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 HS3ST4Q9Y661 456 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 SCINQ9Y6U3 715 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 FAM186AA6NE01 2351 aa15.99■□□□□ 0.15
C9orf3-217ENST00000479161 PLXND1Q9Y4D7 1925 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 ADAM23O75077 832 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 CLDN11O75508 207 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 ATP5BP06576 529 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms