RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 ZNF668Q96K58 619 aaPredicted RBP6.63□□□□□ -1.35
SSR3-207ENST00000478842 PUS3Q9BZE2 481 aaKnown RBP6.63□□□□□ -1.35
SSR3-207ENST00000478842 ZBTB26Q9HCK0 441 aa6.63□□□□□ -1.35
SSR3-207ENST00000478842 AGO4Q9HCK5 861 aaKnown RBP6.63□□□□□ -1.35
SSR3-207ENST00000478842 INTS13Q9NVM9 706 aa6.63□□□□□ -1.35
SSR3-207ENST00000478842 RGL1Q9NZL6 768 aa6.63□□□□□ -1.35
SSR3-207ENST00000478842 CEP72Q9P209 647 aa6.63□□□□□ -1.35
SSR3-207ENST00000478842 DNMT3BQ9UBC3 853 aaKnown RBP6.63□□□□□ -1.35
SSR3-207ENST00000478842 MORF4L1Q9UBU8 362 aa6.63□□□□□ -1.35
SSR3-207ENST00000478842 TSC22D4Q9Y3Q8 395 aa6.63□□□□□ -1.35
SSR3-207ENST00000478842 LRRFIP2Q9Y608 721 aaKnown RBP6.63□□□□□ -1.35
SSR3-207ENST00000478842 BDP1A6H8Y1 2624 aa6.63□□□□□ -1.35
SSR3-207ENST00000478842 MYH2Q9UKX2 1941 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 TRGV11A0A075B6L2 103 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 FAM234BA2RU67 622 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 CREB3O43889 395 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 PIAS2O75928 621 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 RASAL1O95294 804 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 NDUFA10O95299 355 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 IFIT1P09914 478 aaKnown RBP6.62□□□□□ -1.35
SSR3-207ENST00000478842 GABRB3P28472 473 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 PRKAG1P54619 331 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 ELF2Q15723 593 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 GEN1Q17RS7 908 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 ZNF750Q32MQ0 723 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 ZACNQ401N2 412 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 CCDC38Q502W7 563 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 USP39Q53GS9 565 aaKnown RBP6.62□□□□□ -1.35
SSR3-207ENST00000478842 TREML2Q5T2D2 321 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 CACHD1Q5VU97 1274 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 ANKRD42Q8N9B4 389 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 SPATA5Q8NB90 893 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 CPEB3Q8NE35 698 aaKnown RBP6.62□□□□□ -1.35
SSR3-207ENST00000478842 IL17DQ8TAD2 202 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 SOCS4Q8WXH5 440 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 CCT6BQ92526 530 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 PPP2R3CQ969Q6 453 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 FUBP1Q96AE4 644 aaKnown RBP6.62□□□□□ -1.35
SSR3-207ENST00000478842 NACC2Q96BF6 587 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 FAM122AQ96E09 287 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 TRIM5Q9C035 493 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 ZNF768Q9H5H4 540 aaKnown RBP6.62□□□□□ -1.35
SSR3-207ENST00000478842 C9orf78Q9NZ63 289 aaPredicted RBP6.62□□□□□ -1.35
SSR3-207ENST00000478842 NDRG4Q9ULP0 352 aaKnown RBP6.62□□□□□ -1.35
SSR3-207ENST00000478842 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.62□□□□□ -1.35
SSR3-207ENST00000478842 ATAD5Q96QE3 1844 aa6.62□□□□□ -1.35
SSR3-207ENST00000478842 UTYO14607 1347 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 IL16Q14005 1332 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 SALL1Q9NSC2 1324 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 RLFQ13129 1914 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 TMEM200CA6NKL6 621 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 RGS10O43665 173 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 FOXD2O60548 495 aaPredicted RBP6.61□□□□□ -1.35
SSR3-207ENST00000478842 NBNO60934 754 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 CSTBP04080 98 aaKnown RBP6.61□□□□□ -1.35
SSR3-207ENST00000478842 FOSL2P15408 326 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 MAPK4P31152 587 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 PRKAR1BP31321 381 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 HALP42357 657 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 GRK6P43250 576 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 RAB30Q15771 203 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 MAPKAPK3Q16644 382 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 ZIK1Q3SY52 487 aaPredicted RBP6.61□□□□□ -1.35
SSR3-207ENST00000478842 RABL6Q3YEC7 729 aaPredicted RBP6.61□□□□□ -1.35
SSR3-207ENST00000478842 RBM20Q5T481 1227 aaKnown RBP6.61□□□□□ -1.35
SSR3-207ENST00000478842 CERCAMQ5T4B2 595 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 ARHGAP40Q5TG30 622 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 MRNIPQ6NTE8 343 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 TLDC1Q6P9B6 456 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 PALM2Q8IXS6 379 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 SLC15A3Q8IY34 581 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 NKAPQ8N5F7 415 aaKnown RBP6.61□□□□□ -1.35
SSR3-207ENST00000478842 GLIS1Q8NBF1 620 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 USP6NLQ92738 828 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 EXTL1Q92935 676 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.61□□□□□ -1.35
SSR3-207ENST00000478842 OSBPL5Q9H0X9 879 aaPredicted RBP6.61□□□□□ -1.35
SSR3-207ENST00000478842 CXorf36Q9H7Y0 433 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 TMEM8AQ9HCN3 771 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 TBC1D30Q9Y2I9 924 aa6.61□□□□□ -1.35
SSR3-207ENST00000478842 RFX7Q2KHR2 1363 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 A0A087WZ62 844 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 COQ9O75208 318 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 ZFPL1O95159 310 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 NDST3O95803 873 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 ZNF20P17024 532 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 EGR1P18146 543 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 CYP2B6P20813 491 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 HOXA7P31268 230 aaPredicted RBP6.6□□□□□ -1.35
SSR3-207ENST00000478842 CHKAP35790 457 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 RGS2P41220 211 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 GUCY1B3Q02153 619 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 FZD5Q13467 585 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 RAPGEF1Q13905 1077 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 CCNIQ14094 377 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 SHHQ15465 462 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 TIGD2Q4W5G0 525 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 C4orf46Q504U0 113 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 FAXCQ5TGI0 409 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 RGS7BPQ6MZT1 257 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms