RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 LY6G5CQ5SRR4 150 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 SDE2Q6IQ49 451 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 ERICH1Q86X53 443 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 RBBP8NLQ8NC74 664 aaPredicted RBP15.18■□□□□ 0.02
USP11-207ENST00000478596 TTC9Q92623 222 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 FAXDC2Q96IV6 333 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 SYT15Q9BQS2 421 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 TBC1D14Q9P2M4 693 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 FTSJ1Q9UET6 329 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 A0A1B0GVT2 93 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 METTL12A8MUP2 240 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 EPHB6O15197 1021 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 HOXC11O43248 304 aaPredicted RBP15.17■□□□□ 0.02
USP11-207ENST00000478596 TACC1O75410 805 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 GNL1P36915 607 aaPredicted RBP15.17■□□□□ 0.02
USP11-207ENST00000478596 STAT1P42224 750 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 AFF3P51826 1226 aaKnown RBP15.17■□□□□ 0.02
USP11-207ENST00000478596 TMPRSS3P57727 454 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 PSMC1P62191 440 aaKnown RBP15.17■□□□□ 0.02
USP11-207ENST00000478596 ARID5AQ03989 594 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 DRAP1Q14919 205 aaPredicted RBP15.17■□□□□ 0.02
USP11-207ENST00000478596 KIF19Q2TAC6 998 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 TBC1D25Q3MII6 688 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 DCAF12L1Q5VU92 463 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 BTBD8Q5XKL5 378 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 EGFLAMQ63HQ2 1017 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 CHPFQ8IZ52 775 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 KBTBD7Q8WVZ9 684 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 OTUB2Q96DC9 234 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 TNIP3Q96KP6 325 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 KREMEN1Q96MU8 473 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 ACOX2Q99424 681 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 PKMYT1Q99640 499 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 ACBD6Q9BR61 282 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 MED10Q9BTT4 135 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 GPR174Q9BXC1 333 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 NT5C1AQ9BXI3 368 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 RNF38Q9H0F5 515 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 SDCBP2Q9H190 292 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 SLC6A17Q9H1V8 727 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 USP36Q9P275 1121 aaKnown RBP15.17■□□□□ 0.02
USP11-207ENST00000478596 HMGXB4Q9UGU5 601 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 AJAP1Q9UKB5 411 aaPredicted RBP15.17■□□□□ 0.02
USP11-207ENST00000478596 CPQQ9Y646 472 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 ATP8B3O60423 1300 aa15.17■□□□□ 0.02
USP11-207ENST00000478596 F8VZ95 297 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 PAPSS1O43252 624 aaPredicted RBP15.16■□□□□ 0.02
USP11-207ENST00000478596 BRINP1O60477 761 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 GFPT2O94808 682 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 PNMA6AP0CW24 399 aaPredicted RBP15.16■□□□□ 0.02
USP11-207ENST00000478596 CDC25BP30305 580 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 PBX1P40424 430 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 CCT8P50990 548 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 ASIC2Q16515 512 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 INAVAQ3KP66 663 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 OSTM1Q86WC4 334 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 DDX42Q86XP3 938 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP11-207ENST00000478596 SNRNP27Q8WVK2 155 aaKnown RBP15.16■□□□□ 0.02
USP11-207ENST00000478596 IGSF8Q969P0 613 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 FUBP3Q96I24 572 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP11-207ENST00000478596 STK33Q9BYT3 514 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 PDCL3Q9H2J4 239 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 ITM2CQ9NQX7 267 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 TRPM5Q9NZQ8 1165 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 CFAP97Q9P2B7 532 aa15.16■□□□□ 0.02
USP11-207ENST00000478596 LUC7L2Q9Y383 392 aaKnown RBP15.16■□□□□ 0.02
USP11-207ENST00000478596 E2F8A0AVK6 867 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 LRRC53A6NM62 1247 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 SCAMP3O14828 347 aaKnown RBP15.15■□□□□ 0.02
USP11-207ENST00000478596 PTMAP06454 111 aaKnown RBP15.15■□□□□ 0.02
USP11-207ENST00000478596 CCDC172P0C7W6 258 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 CASP14P31944 242 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 CSNK1EP49674 416 aaKnown RBP15.15■□□□□ 0.02
USP11-207ENST00000478596 CLDN6P56747 220 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 CYP27A1Q02318 531 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 INCA1Q0VD86 236 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 TDRD12Q587J7 1177 aaKnown RBP15.15■□□□□ 0.02
USP11-207ENST00000478596 MDH1BQ5I0G3 518 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 SFMBT2Q5VUG0 894 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 KIAA1324Q6UXG2 1013 aaKnown RBP15.15■□□□□ 0.02
USP11-207ENST00000478596 ACOT1Q86TX2 421 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 UNC93AQ86WB7 457 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 CNGA4Q8IV77 575 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 NAT16Q8N8M0 369 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 JAKMIP2Q96AA8 810 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 CEP295NLQ96MC4 621 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 HEXIM2Q96MH2 286 aaKnown RBP15.15■□□□□ 0.02
USP11-207ENST00000478596 LGMNQ99538 433 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 FAM49BQ9NUQ9 324 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 SEPT11Q9NVA2 429 aaKnown RBP15.15■□□□□ 0.02
USP11-207ENST00000478596 ZNHIT6Q9NWK9 470 aaKnown RBP15.15■□□□□ 0.02
USP11-207ENST00000478596 SMPD4Q9NXE4 827 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 EIF2B4Q9UI10 523 aaKnown RBP15.15■□□□□ 0.02
USP11-207ENST00000478596 CDH9Q9ULB4 789 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 SNX11Q9Y5W9 270 aa15.15■□□□□ 0.02
USP11-207ENST00000478596 TEP1Q99973 2627 aaKnown RBP15.14■□□□□ 0.01
USP11-207ENST00000478596 A0A1W2PQJ5 194 aa15.14■□□□□ 0.01
USP11-207ENST00000478596 ZNF840PA6NDX5 716 aa15.14■□□□□ 0.01
USP11-207ENST00000478596 GFRA2O00451 464 aa15.14■□□□□ 0.01
USP11-207ENST00000478596 TRIM66O15016 1216 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms