RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 RNF43Q68DV7 783 aa27.73■■■□□ 2.03
CCM2-211ENST00000478582 C12orf40Q86WS4 652 aa27.73■■■□□ 2.03
CCM2-211ENST00000478582 SYNPOQ8N3V7 929 aa27.73■■■□□ 2.03
CCM2-211ENST00000478582 ARHGEF26Q96DR7 871 aa27.73■■■□□ 2.03
CCM2-211ENST00000478582 ANLNQ9NQW6 1124 aa27.73■■■□□ 2.03
CCM2-211ENST00000478582 A0A0A0MRY4 1105 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.72■■■□□ 2.03
CCM2-211ENST00000478582 I6L893 689 aaPredicted RBP27.72■■■□□ 2.03
CCM2-211ENST00000478582 TULP3O75386 442 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 PAGE1O75459 146 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 TMEM253P0C7T8 217 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 DESP17661 470 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 TACR2P21452 398 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 DRD1P21728 446 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 SLC6A11P48066 632 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 CCR3P51677 355 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 GRSF1Q12849 480 aaKnown RBP eCLIP27.72■■■□□ 2.03
CCM2-211ENST00000478582 GAS6Q14393 721 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 RAB6CQ53S08 254 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 NAIF1Q69YI7 327 aaPredicted RBP27.72■■■□□ 2.03
CCM2-211ENST00000478582 RFWD3Q6PCD5 774 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 FAM131BQ86XD5 332 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 SPEM1Q8N4L4 309 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 DDI1Q8WTU0 396 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 CTNNBL1Q8WYA6 563 aaPredicted RBP27.72■■■□□ 2.03
CCM2-211ENST00000478582 C1orf74Q96LT6 269 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 HAPLN3Q96S86 360 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 PNKPQ96T60 521 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 PACSIN1Q9BY11 444 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 RAB6CQ9H0N0 254 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 FBRSL1Q9HCM7 1045 aaKnown RBP27.72■■■□□ 2.03
CCM2-211ENST00000478582 INTUQ9ULD6 942 aa27.72■■■□□ 2.03
CCM2-211ENST00000478582 TSPAN3O60637 253 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 CYLC1P35663 651 aaPredicted RBP27.71■■■□□ 2.03
CCM2-211ENST00000478582 GSDMDP57764 484 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 PREPLQ4J6C6 727 aaPredicted RBP27.71■■■□□ 2.03
CCM2-211ENST00000478582 RAP1GAP2Q684P5 730 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 FSTL4Q6MZW2 842 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 PHTF2Q8N3S3 785 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 NAT16Q8N8M0 369 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 NELL1Q92832 810 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 NUP85Q9BW27 656 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 SLC2A11Q9BYW1 496 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 TRIM7Q9C029 511 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 PLK2Q9NYY3 685 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 HS3ST4Q9Y661 456 aa27.71■■■□□ 2.03
CCM2-211ENST00000478582 PSMA2P25787 234 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 HOXD9P28356 352 aaPredicted RBP27.7■■■□□ 2.02
CCM2-211ENST00000478582 ADRA1BP35368 520 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 CXCL12P48061 93 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 ZNF252P-AS1Q0IIN9 211 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 ACAP1Q15027 740 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 ARL13BQ3SXY8 428 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 TSSK4Q6SA08 328 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 CHSY1Q86X52 802 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 TMEM139Q8IV31 216 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 HJURPQ8NCD3 748 aaPredicted RBP27.7■■■□□ 2.02
CCM2-211ENST00000478582 NTAN1Q96AB6 310 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 PRICKLE1Q96MT3 831 aaPredicted RBP27.7■■■□□ 2.02
CCM2-211ENST00000478582 BAG1Q99933 345 aaPredicted RBP27.7■■■□□ 2.02
CCM2-211ENST00000478582 FAM126AQ9BYI3 521 aaPredicted RBP27.7■■■□□ 2.02
CCM2-211ENST00000478582 DEC1Q9P2X7 70 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 UVRAGQ9P2Y5 699 aa27.7■■■□□ 2.02
CCM2-211ENST00000478582 EPN1Q9Y6I3 576 aaPredicted RBP27.7■■■□□ 2.02
CCM2-211ENST00000478582 MYOFQ9NZM1 2061 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 EIF3CLB5ME19 914 aaKnown RBP27.69■■■□□ 2.02
CCM2-211ENST00000478582 F5H5T6 163 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 CISD3P0C7P0 127 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 SGSHP51688 502 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 AUHQ13825 339 aaKnown RBP27.69■■■□□ 2.02
CCM2-211ENST00000478582 C5orf22Q49AR2 442 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 Q6ZS52 159 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 LGI2Q8N0V4 545 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 ZBTB44Q8NCP5 570 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 BHMTQ93088 406 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 MYEOVQ96EZ4 313 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 EIF3CQ99613 913 aaKnown RBP27.69■■■□□ 2.02
CCM2-211ENST00000478582 NCAPGQ9BPX3 1015 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 ZSCAN32Q9NX65 697 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 PCDHGA2Q9Y5H1 932 aa27.69■■■□□ 2.02
CCM2-211ENST00000478582 ZFHX2Q9C0A1 2572 aaPredicted RBP27.69■■■□□ 2.02
CCM2-211ENST00000478582 SOWAHDA6NJG2 315 aa27.68■■■□□ 2.02
CCM2-211ENST00000478582 GRIA2P42262 883 aa27.68■■■□□ 2.02
CCM2-211ENST00000478582 FBXL22Q6P050 247 aa27.68■■■□□ 2.02
CCM2-211ENST00000478582 DNAJC17Q9NVM6 304 aaKnown RBP27.68■■■□□ 2.02
CCM2-211ENST00000478582 SLC27A6Q9Y2P4 619 aa27.68■■■□□ 2.02
CCM2-211ENST00000478582 TYW5A2RUC4 315 aaKnown RBP27.67■■■□□ 2.02
CCM2-211ENST00000478582 TBL1XO60907 577 aa27.67■■■□□ 2.02
CCM2-211ENST00000478582 KAT7O95251 611 aa27.67■■■□□ 2.02
CCM2-211ENST00000478582 NDUFA10O95299 355 aa27.67■■■□□ 2.02
CCM2-211ENST00000478582 LMNAP02545 664 aaKnown RBP27.67■■■□□ 2.02
CCM2-211ENST00000478582 TDGF1P13385 188 aa27.67■■■□□ 2.02
CCM2-211ENST00000478582 AIF1P55008 147 aa27.67■■■□□ 2.02
CCM2-211ENST00000478582 SATB1Q01826 763 aa27.67■■■□□ 2.02
CCM2-211ENST00000478582 MESP2Q0VG99 397 aa27.67■■■□□ 2.02
CCM2-211ENST00000478582 SCAPQ12770 1279 aa27.67■■■□□ 2.02
CCM2-211ENST00000478582 PIGHQ14442 188 aaPredicted RBP27.67■■■□□ 2.02
CCM2-211ENST00000478582 TCEAL1Q15170 157 aa27.67■■■□□ 2.02
CCM2-211ENST00000478582 SPA17Q15506 151 aa27.67■■■□□ 2.02
CCM2-211ENST00000478582 FBXO43Q4G163 708 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms