RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 ELOVL2Q9NXB9 296 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 BCCIPQ9P287 314 aaKnown RBP eCLIP12.13□□□□□ -0.472e-6■□□□□ 10.1
SKI-202ENST00000478223 INTS6Q9UL03 887 aaKnown RBP12.13□□□□□ -0.47
SKI-202ENST00000478223 USP18Q9UMW8 372 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 CEP83Q9Y592 693 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 GOLGA8SH3BPF8 625 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 ALDH1A2O94788 518 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 GJB6O95452 261 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 CYP1A1P04798 512 aaPredicted RBP12.12□□□□□ -0.47
SKI-202ENST00000478223 PABPC1P11940 636 aaKnown RBP12.12□□□□□ -0.47
SKI-202ENST00000478223 HLA-EP13747 358 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 GBP1P32455 592 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 FLT3P36888 993 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 P2RY2P41231 377 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 ZNF165P49910 485 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 ZNF445P59923 1031 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 CDR2Q01850 454 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 LMAN2Q12907 356 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 NME3Q13232 169 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 PTPRNQ16849 979 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 FUT11Q495W5 492 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 RAB6CQ53S08 254 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 FAM102AQ5T9C2 384 aaPredicted RBP12.12□□□□□ -0.47
SKI-202ENST00000478223 PMS2CLQ68D20 193 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 CHSY1Q86X52 802 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 ERICH1Q86X53 443 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 LGI2Q8N0V4 545 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 PGBD3Q8N328 593 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 HJURPQ8NCD3 748 aaPredicted RBP12.12□□□□□ -0.47
SKI-202ENST00000478223 ANKRD20A12PQ8NF67 263 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 SLC30A5Q8TAD4 765 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 RMDN1Q96DB5 314 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 C18orf8Q96DM3 657 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 NAP1L5Q96NT1 182 aaPredicted RBP12.12□□□□□ -0.47
SKI-202ENST00000478223 SPAG5Q96R06 1193 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 NPY6RQ99463 290 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 TRIM62Q9BVG3 475 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 RAB6CQ9H0N0 254 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
SKI-202ENST00000478223 TMPRSS4Q9NRS4 437 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 SEMA4GQ9NTN9 838 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 PIGVQ9NUD9 493 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 GGA2Q9UJY4 613 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 SNX10Q9Y5X0 201 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 SHROOM3Q8TF72 1996 aa12.12□□□□□ -0.47
SKI-202ENST00000478223 ASCC3Q8N3C0 2202 aaKnown RBP12.11□□□□□ -0.47
SKI-202ENST00000478223 M0QYT0 321 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 GDF9O60383 454 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 LUC7L3O95232 432 aaKnown RBP12.11□□□□□ -0.47
SKI-202ENST00000478223 ADCY5O95622 1261 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 LSM8O95777 96 aaKnown RBP12.11□□□□□ -0.47
SKI-202ENST00000478223 APOEP02649 317 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 UNGP13051 313 aaPredicted RBP12.11□□□□□ -0.47
SKI-202ENST00000478223 NOS2P35228 1153 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 STAT1P42224 750 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 MATKP42679 507 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 SULT1E1P49888 294 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 COPAP53621 1224 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 CDK17Q00537 523 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 CENPCQ03188 943 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 ARID5AQ03989 594 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 PTP4A2Q12974 167 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 SF3A2Q15428 464 aaKnown RBP12.11□□□□□ -0.47
SKI-202ENST00000478223 USP39Q53GS9 565 aaKnown RBP12.11□□□□□ -0.47
SKI-202ENST00000478223 ARTNQ5T4W7 220 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 MBLAC2Q68D91 279 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 TCEAL6Q6IPX3 200 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 PRR23CQ6ZRP0 262 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 C14orf80Q86SX3 495 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 ZNF677Q86XU0 584 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 CACUL1Q86Y37 369 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 ZDHHC17Q8IUH5 632 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 MFN1Q8IWA4 741 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 CARNMT1Q8N4J0 409 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 TCEAL3Q969E4 200 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 IGSF8Q969P0 613 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 MYO19Q96H55 970 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 BTN2A3PQ96KV6 586 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 MRGPRX1Q96LB2 322 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 TBCBQ99426 244 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 MKRN2Q9H000 416 aaKnown RBP12.11□□□□□ -0.47
SKI-202ENST00000478223 NAT10Q9H0A0 1025 aaKnown RBP12.11□□□□□ -0.47
SKI-202ENST00000478223 MTG2Q9H4K7 406 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 CBX8Q9HC52 389 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 METTL5Q9NRN9 209 aaKnown RBP12.11□□□□□ -0.47
SKI-202ENST00000478223 RXFP3Q9NSD7 469 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.11□□□□□ -0.478e-7■■■■□ 26.4
SKI-202ENST00000478223 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■□□□□ 9
SKI-202ENST00000478223 TMEM59LQ9UK28 342 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 LRRK1Q38SD2 2015 aa12.11□□□□□ -0.47
SKI-202ENST00000478223 CACNA1EQ15878 2313 aa12.1□□□□□ -0.47
SKI-202ENST00000478223 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.1□□□□□ -0.47
SKI-202ENST00000478223 IGHV1OR15-9A0A0B4J2B8 117 aa12.1□□□□□ -0.47
SKI-202ENST00000478223 PAGE1O75459 146 aa12.1□□□□□ -0.47
SKI-202ENST00000478223 CTSOP43234 321 aaPredicted RBP12.1□□□□□ -0.47
SKI-202ENST00000478223 EIF4HQ15056 248 aaKnown RBP12.1□□□□□ -0.47
SKI-202ENST00000478223 CSRP2Q16527 193 aa12.1□□□□□ -0.47
SKI-202ENST00000478223 RSPO4Q2I0M5 234 aaPredicted RBP12.1□□□□□ -0.47
SKI-202ENST00000478223 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
SKI-202ENST00000478223 MPP7Q5T2T1 576 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms