RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 TPI1P60174 286 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 SLC18A2Q05940 514 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 RNF43Q68DV7 783 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 SUGP1Q8IWZ8 645 aaKnown RBP9.14□□□□□ -0.95
CDHR3-211ENST00000478080 GRAMD1AQ96CP6 724 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 PGBD4Q96DM1 585 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 STAMBPL1Q96FJ0 436 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 SRPK1Q96SB4 655 aaKnown RBP9.14□□□□□ -0.95
CDHR3-211ENST00000478080 GORASP1Q9BQQ3 440 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 COLEC11Q9BWP8 271 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 FRMD8Q9BZ67 464 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-211ENST00000478080 TKTL2Q9H0I9 626 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 MANSC1Q9H8J5 431 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 RNF186Q9NXI6 227 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 NUDT5Q9UKK9 219 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 PCDHA11Q9Y5I1 949 aa9.14□□□□□ -0.95
CDHR3-211ENST00000478080 A0A0U1RQF3 1178 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 C2orf71A6NGG8 1288 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 TMEM88BA6NKF7 163 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 TRDMT1O14717 391 aaKnown RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 FBXO21O94952 628 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 GSTA1P08263 222 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 SNRPAP09012 282 aaKnown RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 RPL9P32969 192 aaKnown RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 GMPRP36959 345 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 GLUD2P49448 558 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 ELF3P78545 371 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 SREBF2Q12772 1141 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 SEMA3BQ13214 749 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 DSC3Q14574 896 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 PAFAH1B3Q15102 231 aaKnown RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 PDK1Q15118 436 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 TAC4Q86UU9 113 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 PSTKQ8IV42 348 aaKnown RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 C10orf82Q8WW14 230 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 ARNTL2Q8WYA1 636 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 ERP27Q96DN0 273 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 CELF6Q96J87 481 aaKnown RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 WDCPQ9H6R7 721 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 ZNF395Q9H8N7 513 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 SYBUQ9NX95 663 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 KANSL3Q9P2N6 904 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 NOD1Q9Y239 953 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 FAM159BA6NKW6 160 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 COPEO14579 308 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 KRT37O76014 449 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 FAM163BP0C2L3 166 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 DHRS4L1P0CG22 281 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 SRGAP2BP0DMP2 458 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 ODC1P11926 461 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 NEFHP12036 1026 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 PTPN3P26045 913 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 PCSK1P29120 753 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 FDFT1P37268 417 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 IRX4P78413 519 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 CBLBQ13191 982 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 INTS6LQ5JSJ4 861 aaKnown RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 CES4AQ5XG92 561 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 CCSAPQ6IQ19 270 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 FAM171BQ6P995 826 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 C4orf22Q6V702 233 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 ZNF280BQ86YH2 543 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 ARMC2Q8NEN0 867 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 OR52K1Q8NGK4 314 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 RNF34Q969K3 372 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 ALKBH8Q96BT7 664 aaKnown RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 LRRC39Q96DD0 335 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 APOL2Q9BQE5 337 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 SIK2Q9H0K1 926 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 YY1AP1Q9H869 796 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 CSNK1G1Q9HCP0 422 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 XAB2Q9HCS7 855 aaKnown RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 PCMTD2Q9NV79 361 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 MOCS1Q9NZB8 636 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 UBP1Q9NZI7 540 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 KLHL8Q9P2G9 620 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-211ENST00000478080 OR12D3Q9UGF7 316 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 PSAT1Q9Y617 370 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 PTCH2Q9Y6C5 1203 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 TLL2Q9Y6L7 1015 aa9.13□□□□□ -0.95
CDHR3-211ENST00000478080 TDRD15B5MCY1 1934 aaKnown RBP9.12□□□□□ -0.95
CDHR3-211ENST00000478080 LAMA2P24043 3122 aaKnown RBP9.12□□□□□ -0.95
CDHR3-211ENST00000478080 CCDC195A0A1B0GUA6 201 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 E2F8A0AVK6 867 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 SDR42E2A6NKP2 422 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 PPP1R12AO14974 1030 aaPredicted RBP9.12□□□□□ -0.95
CDHR3-211ENST00000478080 ZBTB24O43167 697 aaPredicted RBP9.12□□□□□ -0.95
CDHR3-211ENST00000478080 OPHN1O60890 802 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 ZNF623O75123 536 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 LRIG2O94898 1065 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 ALADP13716 330 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 EPHB2P29323 1055 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 TM4SF4P48230 202 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 ZBTB17Q13105 803 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 ITGA7Q13683 1181 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 SDHAF4Q5VUM1 108 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 LRRC8BQ6P9F7 803 aa9.12□□□□□ -0.95
CDHR3-211ENST00000478080 BZW1Q7L1Q6 419 aaKnown RBP9.12□□□□□ -0.95
CDHR3-211ENST00000478080 RTN4RL1Q86UN2 441 aaPredicted RBP9.12□□□□□ -0.95
CDHR3-211ENST00000478080 KIRREL3Q8IZU9 778 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms