RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 KIAA1210Q9ULL0 1709 aa4.76□□□□□ -1.65
UBR3-209ENST00000477461 PCDHB2Q9Y5E7 798 aa4.76□□□□□ -1.65
UBR3-209ENST00000477461 ROCK2O75116 1388 aaKnown RBP4.76□□□□□ -1.65
UBR3-209ENST00000477461 PLEKHG1Q9ULL1 1385 aa4.76□□□□□ -1.65
UBR3-209ENST00000477461 TRPM1Q7Z4N2 1603 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 LMTK3Q96Q04 1460 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 TRIP12Q14669 1992 aaPredicted RBP4.75□□□□□ -1.65
UBR3-209ENST00000477461 PIK3C2GO75747 1445 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 C2CD4BA6NLJ0 364 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 TMIGD3P0DMS9 266 aaPredicted RBP4.75□□□□□ -1.65
UBR3-209ENST00000477461 SLC5A1P13866 664 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 RBL1P28749 1068 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 CDKN2AP42771 156 aaKnown RBP4.75□□□□□ -1.65
UBR3-209ENST00000477461 VPS41P49754 854 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 JAK3P52333 1124 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 MTA1Q13330 715 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 FHL3Q13643 280 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 COBLL1Q53SF7 1204 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 MANEAQ5SRI9 462 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 PIGKQ92643 395 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 FCRL5Q96RD9 977 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 CINPQ9BW66 212 aaPredicted RBP4.75□□□□□ -1.65
UBR3-209ENST00000477461 ZNF700Q9H0M5 742 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 FAM83DQ9H4H8 585 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 AGO4Q9HCK5 861 aaKnown RBP4.75□□□□□ -1.65
UBR3-209ENST00000477461 ZBTB40Q9NUA8 1239 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 WWOXQ9NZC7 414 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 COG5Q9UP83 839 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 IQGAP1P46940 1657 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 RALGAPBQ86X10 1494 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 NRXN1Q9ULB1 1477 aa4.75□□□□□ -1.65
UBR3-209ENST00000477461 NPHP4O75161 1426 aaPredicted RBP4.74□□□□□ -1.65
UBR3-209ENST00000477461 SLC22A23A1A5C7 686 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 MBPP02686 304 aaPredicted RBP4.74□□□□□ -1.65
UBR3-209ENST00000477461 MT-ND5P03915 603 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 ST6GAL1P15907 406 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 COPAP53621 1224 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 WDR5P61964 334 aaKnown RBP4.74□□□□□ -1.65
UBR3-209ENST00000477461 RAE1P78406 368 aaKnown RBP4.74□□□□□ -1.65
UBR3-209ENST00000477461 SRSF1Q07955 248 aaKnown RBP eCLIP4.74□□□□□ -1.65
UBR3-209ENST00000477461 SEMA3AQ14563 771 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 DAB2IPQ5VWQ8 1189 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 PELI3Q8N2H9 469 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 ZNF668Q96K58 619 aaPredicted RBP4.74□□□□□ -1.65
UBR3-209ENST00000477461 LYZL4Q96KX0 146 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 COLEC11Q9BWP8 271 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 ZNF212Q9UDV6 495 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 VPS51Q9UID3 782 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 ALKQ9UM73 1620 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 EIF3AQ14152 1382 aaKnown RBP4.74□□□□□ -1.65
UBR3-209ENST00000477461 DIP2AQ14689 1571 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 SETBP1Q9Y6X0 1596 aa4.74□□□□□ -1.65
UBR3-209ENST00000477461 IGLV5-39A0A0G2JS06 123 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 A0A1W2PPC1 479 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 F8W8V4 182 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 WDR47O94967 919 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 INMTO95050 263 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 TOMM40O96008 361 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 TNFRSF1BP20333 461 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 HOXA7P31268 230 aaPredicted RBP4.73□□□□□ -1.65
UBR3-209ENST00000477461 HTR7P34969 479 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 PBX1P40424 430 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 TM4SF4P48230 202 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 MTAPQ13126 283 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 ERV3-1Q14264 604 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 UBE2Q1Q7Z7E8 422 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 CCAR1Q8IX12 1150 aaKnown RBP4.73□□□□□ -1.65
UBR3-209ENST00000477461 ASB5Q8WWX0 329 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 THOC3Q96J01 351 aaKnown RBP4.73□□□□□ -1.65
UBR3-209ENST00000477461 SNX22Q96L94 193 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 NLRP4Q96MN2 994 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 APOL5Q9BWW9 433 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 SEMA4BQ9NPR2 832 aaPredicted RBP4.73□□□□□ -1.65
UBR3-209ENST00000477461 STK26Q9P289 416 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 PCDHGB6Q9Y5F9 930 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 NOTCH4Q99466 2003 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 MED14O60244 1454 aa4.73□□□□□ -1.65
UBR3-209ENST00000477461 NRXN3Q9Y4C0 1643 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 EVPLQ92817 2033 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 APAF1O14727 1248 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 SMAD6O43541 496 aaKnown RBP4.72□□□□□ -1.65
UBR3-209ENST00000477461 UGDHO60701 494 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 PQBP1O60828 265 aaKnown RBP4.72□□□□□ -1.65
UBR3-209ENST00000477461 NDUFB8O95169 186 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 IL6STP40189 918 aaPredicted RBP4.72□□□□□ -1.65
UBR3-209ENST00000477461 CASP5P51878 434 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 DNASE1L3Q13609 305 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 PRTGQ2VWP7 1150 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 FAM57BQ71RH2 274 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 RNF44Q7L0R7 432 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 ADGRF4Q8IZF3 695 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 SDR16C5Q8N3Y7 309 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 IPCEF1Q8WWN9 437 aaPredicted RBP4.72□□□□□ -1.65
UBR3-209ENST00000477461 CAPN11Q9UMQ6 739 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 PROCRQ9UNN8 238 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 GPRASP1Q5JY77 1395 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 USP47Q96K76 1375 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 SETD1AO15047 1707 aaKnown RBP4.72□□□□□ -1.65
UBR3-209ENST00000477461 ADAMTS13Q76LX8 1427 aa4.72□□□□□ -1.65
UBR3-209ENST00000477461 YTHDC2Q9H6S0 1430 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms