RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 CNTN5O94779 1100 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 PROSCO94903 275 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 LATS1O95835 1130 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 PENKP01210 267 aaPredicted RBP16.42■□□□□ 0.22
COPS3-207ENST00000477299 PTMAP06454 111 aaKnown RBP16.42■□□□□ 0.22
COPS3-207ENST00000477299 HOXD9P28356 352 aaPredicted RBP16.42■□□□□ 0.22
COPS3-207ENST00000477299 NOP2P46087 812 aaKnown RBP16.42■□□□□ 0.22
COPS3-207ENST00000477299 GAD2Q05329 585 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 KDSRQ06136 332 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 TCEAL1Q15170 157 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 SLFN11Q7Z7L1 901 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 KIAA1328Q86T90 577 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 ETFBKMTQ8IXQ9 262 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 ANP32BQ92688 251 aaKnown RBP16.42■□□□□ 0.22
COPS3-207ENST00000477299 ZWILCHQ9H900 591 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 MPP6Q9NZW5 540 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 MARK1Q9P0L2 795 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 SLC12A6Q9UHW9 1150 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 PAXBP1Q9Y5B6 917 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 HOXC11O43248 304 aaPredicted RBP16.41■□□□□ 0.22
COPS3-207ENST00000477299 BUB1BO60566 1050 aaPredicted RBP16.41■□□□□ 0.22
COPS3-207ENST00000477299 TULP3O75386 442 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 ADH1CP00326 375 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 CISD3P0C7P0 127 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 NR1H3Q13133 447 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 PIGHQ14442 188 aaPredicted RBP16.41■□□□□ 0.22
COPS3-207ENST00000477299 ALFQ53S48 1182 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 KCNT1Q5JUK3 1230 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 FSTL4Q6MZW2 842 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 RHOT2Q8IXI1 618 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 ZNF687Q8N1G0 1237 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 PHTF2Q8N3S3 785 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 NIPA2Q8N8Q9 360 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 CCDC112Q8NEF3 446 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 NTAN1Q96AB6 310 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 HAPLN3Q96S86 360 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 PPP1R9BQ96SB3 815 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 SNRNP25Q9BV90 132 aaKnown RBP16.41■□□□□ 0.22
COPS3-207ENST00000477299 C11orf16Q9NQ32 467 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 RBM12Q9NTZ6 932 aaKnown RBP16.41■□□□□ 0.22
COPS3-207ENST00000477299 USP18Q9UMW8 372 aa16.41■□□□□ 0.22
COPS3-207ENST00000477299 NDRG2Q9UN36 371 aaKnown RBP16.41■□□□□ 0.22
COPS3-207ENST00000477299 TMEM221A6NGB7 291 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 M0R296 226 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 PI15O43692 258 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 RNF8O76064 485 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 ALADP13716 330 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 TARSP26639 723 aaKnown RBP16.4■□□□□ 0.22
COPS3-207ENST00000477299 GJC1P36383 396 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 ARHGAP25P42331 645 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 SSR1P43307 286 aaKnown RBP16.4■□□□□ 0.22
COPS3-207ENST00000477299 STARD6P59095 220 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 KRT83P78385 493 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 SLC25A11Q02978 314 aaKnown RBP16.4■□□□□ 0.22
COPS3-207ENST00000477299 FZD5Q13467 585 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 SMTNL2Q2TAL5 461 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 MPPE1Q53F39 396 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 FSCBQ5H9T9 825 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 RALGPS2Q86X27 583 aaPredicted RBP16.4■□□□□ 0.22
COPS3-207ENST00000477299 OR52K2Q8NGK3 314 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 TPCN2Q8NHX9 752 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 FAM3CQ92520 227 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 KCTD15Q96SI1 283 aaPredicted RBP16.4■□□□□ 0.22
COPS3-207ENST00000477299 P2RY13Q9BPV8 354 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 C8orf33Q9H7E9 229 aaPredicted RBP16.4■□□□□ 0.22
COPS3-207ENST00000477299 TBC1D17Q9HA65 648 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 ZDHHC4Q9NPG8 344 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 DNAJC17Q9NVM6 304 aaKnown RBP16.4■□□□□ 0.22
COPS3-207ENST00000477299 OR12D3Q9UGF7 316 aa16.4■□□□□ 0.22
COPS3-207ENST00000477299 CHD5Q8TDI0 1954 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 MACROD2A1Z1Q3 448 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 E9PAM4 449 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 F5H5T6 163 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 CACNG3O60359 315 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 IPO7O95373 1038 aaKnown RBP16.39■□□□□ 0.21
COPS3-207ENST00000477299 MOCS3O95396 460 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 EGFP01133 1207 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 RARAP10276 462 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 PCK1P35558 622 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 SCAPQ12770 1279 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 ERMARDQ5T6L9 678 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 EMC10Q5UCC4 262 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 MANEALQ5VSG8 457 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 CWF19L1Q69YN2 538 aaKnown RBP16.39■□□□□ 0.21
COPS3-207ENST00000477299 CARNMT1Q8N4J0 409 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 HJURPQ8NCD3 748 aaPredicted RBP16.39■□□□□ 0.21
COPS3-207ENST00000477299 FLCNQ8NFG4 579 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 HSPH1Q92598 858 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 CD101Q93033 1021 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 LMLNQ96KR4 655 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 C1orf74Q96LT6 269 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 RPRD1AQ96P16 312 aaPredicted RBP16.39■□□□□ 0.21
COPS3-207ENST00000477299 OSBPL2Q9H1P3 480 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 DHX35Q9H5Z1 703 aaKnown RBP16.39■□□□□ 0.21
COPS3-207ENST00000477299 NDFIP2Q9NV92 336 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 KLHL11Q9NVR0 708 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 FBXO10Q9UK96 956 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 HCN2Q9UL51 889 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 AP4E1Q9UPM8 1137 aa16.39■□□□□ 0.21
COPS3-207ENST00000477299 NEU3Q9UQ49 428 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms