RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 PABPC3Q9H361 631 aaKnown RBP8.07□□□□□ -1.12
RBM39-230ENST00000476806 PRDM5Q9NQX1 630 aaPredicted RBP8.07□□□□□ -1.12
RBM39-230ENST00000476806 IL37Q9NZH6 218 aa8.07□□□□□ -1.12
RBM39-230ENST00000476806 ANAPC5Q9UJX4 755 aa8.07□□□□□ -1.12
RBM39-230ENST00000476806 FBXW11Q9UKB1 542 aa8.07□□□□□ -1.12
RBM39-230ENST00000476806 TRHDEQ9UKU6 1024 aa8.07□□□□□ -1.12
RBM39-230ENST00000476806 TPX2Q9ULW0 747 aaKnown RBP8.07□□□□□ -1.12
RBM39-230ENST00000476806 HBS1LQ9Y450 684 aaKnown RBP8.07□□□□□ -1.12
RBM39-230ENST00000476806 TIMM13Q9Y5L4 95 aaPredicted RBP8.07□□□□□ -1.12
RBM39-230ENST00000476806 PTPRDP23468 1912 aa8.07□□□□□ -1.12
RBM39-230ENST00000476806 FNDC1Q4ZHG4 1894 aaPredicted RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 MTMR11A4FU01 709 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 CLDN5O00501 218 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 ATP2C2O75185 946 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 GRAP2O75791 330 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 NEBLO76041 1014 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 FGBP02675 491 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 ADH1AP07327 375 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 ABHD2P08910 425 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 USP17L7P0C7H9 530 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 HAPLN1P10915 354 aaPredicted RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 ADRA1BP35368 520 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 PTGIRP43119 386 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 CARSP49589 748 aaKnown RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 CXCR3P49682 368 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 PMS2P54278 862 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 EPHB3P54753 998 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 PLTPP55058 493 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 WDR5P61964 334 aaKnown RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 RBM10P98175 930 aaKnown RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 NME3Q13232 169 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 NAA30Q147X3 362 aaPredicted RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 PAFAH1B3Q15102 231 aaKnown RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 PPP6R3Q5H9R7 873 aaPredicted RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 KCNT1Q5JUK3 1230 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 SNX30Q5VWJ9 437 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 ADAT2Q7Z6V5 191 aaKnown RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 PHLDB2Q86SQ0 1253 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 SCN4BQ8IWT1 228 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 RNF168Q8IYW5 571 aaPredicted RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 SLC39A11Q8N1S5 342 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 BBS5Q8N3I7 341 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 ZCCHC9Q8N567 271 aaKnown RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 ZMIZ2Q8NF64 920 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 ZNF461Q8TAF7 563 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 FAM174AQ8TBP5 190 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 UBLCP1Q8WVY7 318 aaPredicted RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 C1orf54Q8WWF1 131 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 CASKIN2Q8WXE0 1202 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 FATE1Q969F0 183 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 EXOC4Q96A65 974 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 CSPG4P5Q96PW8 444 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 GDF15Q99988 308 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 LBHD1Q9BQE6 289 aaPredicted RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 RTP3Q9BQQ7 232 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 PAAF1Q9BRP4 392 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 UBE2OQ9C0C9 1292 aaKnown RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 DPH5Q9H2P9 285 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 XAB2Q9HCS7 855 aaKnown RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 EIF2B3Q9NR50 452 aaKnown RBP8.06□□□□□ -1.12
RBM39-230ENST00000476806 CHST7Q9NS84 486 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 MARCH5Q9NX47 278 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 ARHGEF38Q9NXL2 777 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 SMARCAL1Q9NZC9 954 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 SENP1Q9P0U3 644 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 DNAJB4Q9UDY4 337 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 FETUBQ9UGM5 382 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 DNPEPQ9ULA0 475 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 HPCAL4Q9UM19 191 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 NME7Q9Y5B8 376 aa8.06□□□□□ -1.12
RBM39-230ENST00000476806 COL4A4P53420 1690 aaPredicted RBP8.05□□□□□ -1.12
RBM39-230ENST00000476806 C5orf60A6NFR6 353 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 YJEFN3A6XGL0 299 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 E7ENQ6 273 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 E7EVH7 732 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 PI4K2BG5E9Z4 385 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 TULP2O00295 520 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 TNFRSF10BO14763 440 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 TBC1D4O60343 1298 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 UPP2O95045 317 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 IFNB1P01574 187 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 IGLV3-25P01717 112 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 RB1P06400 928 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 SRGAP2BP0DMP2 458 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 IL1R2P27930 398 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 SLC11A2P49281 568 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 HARS2P49590 506 aaKnown RBP8.05□□□□□ -1.12
RBM39-230ENST00000476806 AFF1P51825 1210 aaKnown RBP8.05□□□□□ -1.12
RBM39-230ENST00000476806 OXCT1P55809 520 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 GABPB1Q06547 395 aaPredicted RBP8.05□□□□□ -1.12
RBM39-230ENST00000476806 DHX9Q08211 1270 aaKnown RBP8.05□□□□□ -1.12
RBM39-230ENST00000476806 CBLBQ13191 982 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 RAB33AQ14088 237 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 PRPSAP1Q14558 356 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 STAT4Q14765 748 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
RBM39-230ENST00000476806 TRIP4Q15650 581 aaPredicted RBP8.05□□□□□ -1.12
RBM39-230ENST00000476806 HIF1AQ16665 826 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 LRRC26Q2I0M4 334 aa8.05□□□□□ -1.12
RBM39-230ENST00000476806 IZUMO3Q5VZ72 239 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms