RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 CADM4Q8NFZ8 388 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 OR2T3Q8NH03 318 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 FOXJ1Q92949 421 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 TTC17Q96AE7 1141 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 PPP1R13BQ96KQ4 1090 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 HSPA12BQ96MM6 686 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 PRICKLE1Q96MT3 831 aaPredicted RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 CPXM1Q96SM3 734 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 TUBGCP2Q9BSJ2 902 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 NUCKS1Q9H1E3 243 aaKnown RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 NUP62CLQ9H1M0 184 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 LMBRD1Q9NUN5 540 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.2□□□□□ -0.62
SEC13-214ENST00000476597 ASNSD1Q9NWL6 643 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 STIM2Q9P246 746 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 DACH1Q9UI36 760 aa11.2□□□□□ -0.62
SEC13-214ENST00000476597 AJAP1Q9UKB5 411 aaPredicted RBP11.2□□□□□ -0.62
SEC13-214ENST00000476597 MOCS2O96007 188 aaPredicted RBP11.19□□□□□ -0.62
SEC13-214ENST00000476597 CFIP05156 583 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 ACADMP11310 421 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 TACR2P21452 398 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 KCNA4P22459 653 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 PMLP29590 882 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 KRT9P35527 623 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 RPS24P62847 133 aaKnown RBP11.19□□□□□ -0.62
SEC13-214ENST00000476597 PITX1P78337 314 aaPredicted RBP11.19□□□□□ -0.62
SEC13-214ENST00000476597 KCNMA1Q12791 1236 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 UAP1L1Q3KQV9 507 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 FNDC3BQ53EP0 1204 aaKnown RBP11.19□□□□□ -0.62
SEC13-214ENST00000476597 DCAF6Q58WW2 860 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 EFHC1Q5JVL4 640 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 WDR45BQ5MNZ6 344 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 SYCP2LQ5T4T6 812 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 SLC47A2Q86VL8 602 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 MFN1Q8IWA4 741 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 FAM71AQ8IYT1 594 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 RGL4Q8IZJ4 473 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 DEFB106AQ8N104 65 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 DNASE2BQ8WZ79 361 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 CNTNAP3BQ96NU0 1288 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 SLC2A13Q96QE2 648 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 NUP58Q9BVL2 599 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 GPR174Q9BXC1 333 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 CNTNAP3Q9BZ76 1288 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 PRSS16Q9NQE7 514 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 SUN2Q9UH99 717 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 XPO7Q9UIA9 1087 aaKnown RBP11.19□□□□□ -0.62
SEC13-214ENST00000476597 INTS6Q9UL03 887 aaKnown RBP11.19□□□□□ -0.62
SEC13-214ENST00000476597 NFE2L3Q9Y4A8 694 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 RALGAPA1Q6GYQ0 2036 aa11.19□□□□□ -0.62
SEC13-214ENST00000476597 TYW5A2RUC4 315 aaKnown RBP11.18□□□□□ -0.62
SEC13-214ENST00000476597 METTL12A8MUP2 240 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 KCNU1A8MYU2 1149 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 ARHGAP33O14559 1287 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 APOEP02649 317 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 CEACAM1P13688 526 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 MAOBP27338 520 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 MAPK8P45983 427 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 NOVA1P51513 510 aaKnown RBP11.18□□□□□ -0.62
SEC13-214ENST00000476597 BPIFB4P59827 614 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 CDK17Q00537 523 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 HSP90AA4PQ58FG1 418 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 FSCBQ5H9T9 825 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 SH3PXD2AQ5TCZ1 1133 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 KLHDC7AQ5VTJ3 777 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 RAP1GAP2Q684P5 730 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 PSAPL1Q6NUJ1 521 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 OLFML1Q6UWY5 402 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 C11orf57Q6ZUT1 292 aaPredicted RBP11.18□□□□□ -0.62
SEC13-214ENST00000476597 PASD1Q8IV76 773 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 CCDC117Q8IWD4 279 aaPredicted RBP11.18□□□□□ -0.62
SEC13-214ENST00000476597 LGI2Q8N0V4 545 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 CFAP52Q8N1V2 620 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 CARNMT1Q8N4J0 409 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 ZNF366Q8N895 744 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 ATP6V0D2Q8N8Y2 350 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 KDM1BQ8NB78 822 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 C1orf131Q8NDD1 294 aaKnown RBP11.18□□□□□ -0.62
SEC13-214ENST00000476597 MYO19Q96H55 970 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 BTN2A3PQ96KV6 586 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 MRGPRX3Q96LB0 322 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 NOX5Q96PH1 765 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 PRMT1Q99873 361 aaKnown RBP11.18□□□□□ -0.62
SEC13-214ENST00000476597 NAA15Q9BXJ9 866 aaKnown RBP11.18□□□□□ -0.62
SEC13-214ENST00000476597 FBRSQ9HAH7 460 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 FSCN3Q9NQT6 498 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 SAMSN1Q9NSI8 373 aaKnown RBP11.18□□□□□ -0.62
SEC13-214ENST00000476597 SUSD2Q9UGT4 822 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 SLC12A6Q9UHW9 1150 aa11.18□□□□□ -0.62
SEC13-214ENST00000476597 THADAQ6YHU6 1953 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 UPK3BL1B0FP48 263 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 UPK3BL2E5RIL1 263 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 GIPC1O14908 333 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 HSF2BPO75031 334 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 LUC7L3O95232 432 aaKnown RBP11.17□□□□□ -0.62
SEC13-214ENST00000476597 ASLP04424 464 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 ERBB2P04626 1255 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 SYPP08247 313 aa11.17□□□□□ -0.62
SEC13-214ENST00000476597 PNMA6AP0CW24 399 aaPredicted RBP11.17□□□□□ -0.62
SEC13-214ENST00000476597 SLC2A3P11169 496 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms