RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 DPF1Q92782 380 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 RILPL2Q969X0 211 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 EFHD1Q9BUP0 239 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 BAG5Q9UL15 447 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 MAFFQ9ULX9 164 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 PCDHA10Q9Y5I2 948 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 SIRT4Q9Y6E7 314 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-211ENST00000476215 AGAP5A6NIR3 686 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 MBD3L5A6NJ08 208 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-211ENST00000476215 C16orf96A6NNT2 1141 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 RNF8O76064 485 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 KAT7O95251 611 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 ALDOAP04075 364 aaKnown RBP5.57□□□□□ -1.52
PTCD3-211ENST00000476215 PRKCGP05129 697 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 CYP3A4P08684 503 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 CCT5P48643 541 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 FOXL2P58012 376 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 PDCLQ13371 301 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 DGAT2L7PQ6IED9 249 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 SYNE3Q6ZMZ3 975 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 SYT13Q7L8C5 426 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 ANKRD18AQ8IVF6 992 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 PNISRQ8TF01 805 aaKnown RBP5.57□□□□□ -1.52
PTCD3-211ENST00000476215 GPR78Q96P69 363 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 SENP7Q9BQF6 1050 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 TRIM2Q9C040 744 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 PRDM16Q9HAZ2 1276 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 LZTS1Q9Y250 596 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 B3GNT3Q9Y2A9 372 aa5.57□□□□□ -1.52
PTCD3-211ENST00000476215 C3orf70A6NLC5 250 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-211ENST00000476215 B9A039 149 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 HEXIM1O94992 359 aaKnown RBP5.56□□□□□ -1.52
PTCD3-211ENST00000476215 CDK4P11802 303 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 HSD3B1P14060 373 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 SFPQP23246 707 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTCD3-211ENST00000476215 RBM5P52756 815 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTCD3-211ENST00000476215 RCAN1P53805 252 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 SLC10A2Q12908 348 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-211ENST00000476215 TMEM95Q3KNT9 176 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 KIAA1614Q5VZ46 1190 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 SLC39A5Q6ZMH5 540 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 C2CD5Q86YS7 1000 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 CERS3Q8IU89 383 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 SMAP1Q8IYB5 467 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-211ENST00000476215 SPPL3Q8TCT6 385 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 CLEC4CQ8WTT0 213 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 CELF1Q92879 486 aaKnown RBP5.56□□□□□ -1.52
PTCD3-211ENST00000476215 GCC1Q96CN9 775 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 ZNF845Q96IR2 970 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-211ENST00000476215 ZSCAN31Q96LW9 406 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-211ENST00000476215 C5orf34Q96MH7 638 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 ABHD16BQ9H3Z7 469 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 G6PC2Q9NQR9 355 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 FLRT1Q9NZU1 646 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 FEM1BQ9UK73 627 aa5.56□□□□□ -1.52
PTCD3-211ENST00000476215 CREB3O43889 395 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 LATS1O95835 1130 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 CYP21A2P08686 494 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 RXRAP19793 462 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 TACR3P29371 465 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 PCP4P48539 62 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 ZNF84P51523 738 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 SLC37A1P57057 533 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 SEC23BQ15437 767 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 SMAD1Q15797 465 aaKnown RBP5.55□□□□□ -1.52
PTCD3-211ENST00000476215 GLE1Q53GS7 698 aaKnown RBP5.55□□□□□ -1.52
PTCD3-211ENST00000476215 C1QL2Q7Z5L3 287 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 TFAP2DQ7Z6R9 452 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 C8orf58Q8NAV2 365 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 ADPRHL1Q8NDY3 354 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 OSR1Q8TAX0 266 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-211ENST00000476215 PPM1EQ8WY54 764 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 SDCCAG3Q96C92 435 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 HTATIP2Q9BUP3 242 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 C1QTNF7Q9BXJ2 289 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 CHMP4AQ9BY43 222 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 CHODLQ9H9P2 273 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 TMLHEQ9NVH6 421 aa5.55□□□□□ -1.52
PTCD3-211ENST00000476215 COPG1Q9Y678 874 aaKnown RBP5.55□□□□□ -1.52
PTCD3-211ENST00000476215 CYP3A7-CYP3A51PA0A087WV96 503 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 FAM90A20PA6NIJ5 464 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 RRHO14718 337 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 TFRCP02786 760 aaKnown RBP5.54□□□□□ -1.52
PTCD3-211ENST00000476215 TK1P04183 234 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 CYP3A7P24462 503 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 IDUAP35475 653 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 ACTR2P61160 394 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 SHC2P98077 582 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 DMWDQ09019 674 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 ZNF268Q14587 947 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-211ENST00000476215 FAM110CQ1W6H9 321 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 LRRC24Q50LG9 513 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 FBXO47Q5MNV8 452 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 TMEM88Q6PEY1 159 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 DHRS13Q6UX07 377 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 ZNF813Q6ZN06 617 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 ZNF66Q6ZN08 573 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 ZNF398Q8TD17 642 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 SLC2A12Q8TD20 617 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms