RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 TRAPPC11Q7Z392 1133 aa14.74□□□□□ -0.05
ATG9A-220ENST00000475339 FAM186BQ8IYM0 893 aa14.74□□□□□ -0.05
ATG9A-220ENST00000475339 MYCBPAPQ8TBZ2 947 aa14.74□□□□□ -0.05
ATG9A-220ENST00000475339 HPDLQ96IR7 371 aa14.74□□□□□ -0.05
ATG9A-220ENST00000475339 NACA2Q9H009 215 aa14.74□□□□□ -0.05
ATG9A-220ENST00000475339 BTBD1Q9H0C5 482 aa14.74□□□□□ -0.05
ATG9A-220ENST00000475339 SEPT3Q9UH03 358 aa14.74□□□□□ -0.05
ATG9A-220ENST00000475339 SIX4Q9UIU6 781 aa14.74□□□□□ -0.05
ATG9A-220ENST00000475339 FBXO10Q9UK96 956 aa14.74□□□□□ -0.05
ATG9A-220ENST00000475339 IGHV4-34P06331 123 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 ITGB6P18564 788 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 ACP1P24666 158 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 CCR10P46092 362 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 MFAP3P55082 362 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 E2F1Q01094 437 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 TLE1Q04724 770 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 LRRC63Q05C16 580 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 ZCWPW2Q504Y3 356 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 MDH1BQ5I0G3 518 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 KLHL10Q6JEL2 608 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 INTS8Q75QN2 995 aaKnown RBP14.73□□□□□ -0.05
ATG9A-220ENST00000475339 NUP93Q8N1F7 819 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 PDZD8Q8NEN9 1154 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 OR2T3Q8NH03 318 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 UCMAQ8WVF2 138 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 SORCS1Q8WY21 1168 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 MMS19Q96T76 1030 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 CLSTN2Q9H4D0 955 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 POLR1BQ9H9Y6 1135 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.73□□□□□ -0.054e-6■■■■■ 71
ATG9A-220ENST00000475339 THSD1Q9NS62 852 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 CKAP5Q14008 2032 aa14.73□□□□□ -0.05
ATG9A-220ENST00000475339 LRRIQ3A6PVS8 624 aaPredicted RBP14.72□□□□□ -0.05
ATG9A-220ENST00000475339 MAPK13O15264 365 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 ARRB1P49407 418 aaPredicted RBP14.72□□□□□ -0.05
ATG9A-220ENST00000475339 TUBP50607 506 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 VAMP7P51809 220 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 MORC3Q14149 939 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 SFMBT2Q5VUG0 894 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 SNX30Q5VWJ9 437 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 SERPINA13PQ6UXR4 307 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 SCAMP5Q8TAC9 235 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 TMC2Q8TDI7 906 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 PARD3BQ8TEW8 1205 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 OVCA2Q8WZ82 227 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 DHTKD1Q96HY7 919 aaPredicted RBP14.72□□□□□ -0.05
ATG9A-220ENST00000475339 ZNF518BQ9C0D4 1074 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 NUP62CLQ9H1M0 184 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 GDF3Q9NR23 364 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 MAN2B2Q9Y2E5 1009 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 SLC27A6Q9Y2P4 619 aa14.72□□□□□ -0.05
ATG9A-220ENST00000475339 TP53BP1Q12888 1972 aaPredicted RBP14.72□□□□□ -0.05
ATG9A-220ENST00000475339 BICDL2A1A5D9 508 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 YKT6O15498 198 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 TBX18O95935 607 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 PGFP49763 221 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 TNNC1P63316 161 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 FKBP3Q00688 224 aaKnown RBP14.71□□□□□ -0.05
ATG9A-220ENST00000475339 ARL13BQ3SXY8 428 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 KIAA0895LQ68EN5 471 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 HIST2H2BCQ6DN03 193 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 DPH6Q7L8W6 267 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 LIMS2Q7Z4I7 341 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 PLEKHO2Q8TD55 490 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 SYAP1Q96A49 352 aaPredicted RBP14.71□□□□□ -0.05
ATG9A-220ENST00000475339 SKA1Q96BD8 255 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 EEF2KMTQ96G04 330 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 PSMG3-AS1Q96PY0 264 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 KLF16Q9BXK1 252 aaPredicted RBP14.71□□□□□ -0.05
ATG9A-220ENST00000475339 EBF2Q9HAK2 575 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 LMBRD1Q9NUN5 540 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 ELOVL2Q9NXB9 296 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 KIAA1468Q9P260 1216 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 CTNND2Q9UQB3 1225 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 NME7Q9Y5B8 376 aa14.71□□□□□ -0.05
ATG9A-220ENST00000475339 MYH10P35580 1976 aa14.71□□□□□ -0.06
ATG9A-220ENST00000475339 UTP20O75691 2785 aaKnown RBP14.7□□□□□ -0.06
ATG9A-220ENST00000475339 ICE1Q9Y2F5 2266 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 A0A1W2PPC4 97 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 TRIM49BA6NDI0 452 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 FAM47DPA6NHR8 397 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 CLDN5O00501 218 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 WNT9AO14904 365 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 SLC16A3O15427 465 aaKnown RBP14.7□□□□□ -0.06
ATG9A-220ENST00000475339 TLR5O60602 858 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 RTN3O95197 1032 aaPredicted RBP14.7□□□□□ -0.06
ATG9A-220ENST00000475339 ZDHHC11BP0C7U3 371 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 TRIM49P0CI25 452 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 TRIM49CP0CI26 452 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 PIK3CAP42336 1068 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 DLG4P78352 724 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 CAMK2GQ13555 558 aaPredicted RBP14.7□□□□□ -0.06
ATG9A-220ENST00000475339 NCOA4Q13772 614 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 ZNF699Q32M78 642 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 PROX2Q3B8N5 592 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 CDCP2Q5VXM1 449 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 ANKRD40Q6AI12 368 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 KANSL1Q7Z3B3 1105 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 NELFBQ8WX92 580 aa14.7□□□□□ -0.06
ATG9A-220ENST00000475339 EXTL1Q92935 676 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms