RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 ZNF212Q9UDV6 495 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 PNMA8BQ9ULN7 279 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 ACTL7BQ9Y614 415 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 CACNG2Q9Y698 323 aa6.18□□□□□ -1.42
ECHDC1-215ENST00000475319 KIF1BO60333 1816 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 DBX1A6NMT0 343 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 H7C0C1 242 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 ARVCFO00192 962 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 RTCAO00442 366 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 PLOD2O00469 737 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 FOXP2O15409 715 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 AP1G1O43747 822 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 DKC1O60832 514 aaKnown RBP eCLIP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 LRRN2O75325 713 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 SNX4O95219 450 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 CD4P01730 458 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 CAPN1P07384 714 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 FAM228BP0C875 321 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 TRIM27P14373 513 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 GSPT1P15170 499 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 LRPAP1P30533 357 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 GRIK1P39086 918 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 RPL5P46777 297 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 LSSP48449 732 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 SLC9A3P48764 834 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 VPS41P49754 854 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 RASSF2P50749 326 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 EIF4A1P60842 406 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 ACY1Q03154 408 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 CSTF3Q12996 717 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 RESTQ13127 1097 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 TBX2Q13207 712 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 SSPNQ14714 243 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 PCBP2Q15366 365 aaKnown RBP eCLIP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 VWA5B1Q5TIE3 1220 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 IL31Q6EBC2 164 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 DCDC5Q6ZRR9 648 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 PIK3AP1Q6ZUJ8 805 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 ACAD11Q709F0 780 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 DPP9Q86TI2 863 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 RASSF3Q86WH2 238 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 ERI1Q8IV48 349 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 NELFCDQ8IXH7 590 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 OR8H2Q8N162 312 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 CSGALNACT2Q8N6G5 542 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 C12orf50Q8NA57 414 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 PPHLN1Q8NEY8 458 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 SLC2A14Q8TDB8 520 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 CHTF18Q8WVB6 975 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 RNF141Q8WVD5 230 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 RAPGEF5Q92565 580 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 CCDC51Q96ER9 411 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 AHCYL2Q96HN2 611 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 OSBPL6Q9BZF3 934 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 SLC13A1Q9BZW2 595 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 RNF38Q9H0F5 515 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 RNF208Q9H0X6 261 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 DPH5Q9H2P9 285 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 OR51B5Q9H339 312 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 PPCSQ9HAB8 311 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 MRM3Q9HC36 420 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 TCF7L1Q9HCS4 588 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 NLRC4Q9NPP4 1024 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 PRDM11Q9NQV5 511 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 GGA3Q9NZ52 723 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 DPP7Q9UHL4 492 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 GNPTGQ9UJJ9 305 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 ZBTB21Q9ULJ3 1066 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 DUSP12Q9UNI6 340 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 STK38LQ9Y2H1 464 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 SF3B6Q9Y3B4 125 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 SPHKAPQ2M3C7 1700 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 LRP6O75581 1613 aa6.17□□□□□ -1.42
ECHDC1-215ENST00000475319 METP08581 1390 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 MROH7-TTC4A0A0A0MT08 1334 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 UMODL1Q5DID0 1318 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 OR5K3A6NET4 321 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 TRPC5OSA6NMA1 111 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 H0Y8X5 98 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 hCG_1984214I3L0E3 225 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 MEIS1O00470 390 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 TRMUO75648 421 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 SUN1O94901 812 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 SLITRK5O94991 958 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 TIAF1O95411 115 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 SLC4A1P02730 911 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 CKMP06732 381 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 THBDP07204 575 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 SRGAP2CP0DJJ0 459 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 GAP43P17677 238 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 ITIH2P19823 946 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 ABCG1P45844 678 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 IREB2P48200 963 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 FXR1P51114 621 aaKnown RBP eCLIP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 ADCY7P51828 1080 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 NEK3P51956 506 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 AP2S1P53680 142 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 MYL6P60660 151 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 STX1BP61266 288 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms