RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 NUDT17P0C025 328 aa20.41■□□□□ 0.86
SSR1-204ENST00000474597 TRIP4Q15650 581 aaPredicted RBP20.41■□□□□ 0.86
SSR1-204ENST00000474597 CENPUQ71F23 418 aa20.41■□□□□ 0.86
SSR1-204ENST00000474597 NAT8LQ8N9F0 302 aa20.41■□□□□ 0.86
SSR1-204ENST00000474597 CCDC110Q8TBZ0 833 aa20.41■□□□□ 0.86
SSR1-204ENST00000474597 OVCA2Q8WZ82 227 aa20.41■□□□□ 0.86
SSR1-204ENST00000474597 SLC39A13Q96H72 371 aa20.41■□□□□ 0.86
SSR1-204ENST00000474597 SAYSD1Q9NPB0 183 aa20.41■□□□□ 0.86
SSR1-204ENST00000474597 RAB6BQ9NRW1 208 aa20.41■□□□□ 0.86
SSR1-204ENST00000474597 CXXC1Q9P0U4 656 aaPredicted RBP20.41■□□□□ 0.86
SSR1-204ENST00000474597 FNIP2Q9P278 1114 aa20.41■□□□□ 0.86
SSR1-204ENST00000474597 SLC4A7Q9Y6M7 1214 aa20.41■□□□□ 0.86
SSR1-204ENST00000474597 SLC12A8A0AV02 714 aa20.4■□□□□ 0.86
SSR1-204ENST00000474597 GOLGA8MH3BSY2 632 aa20.4■□□□□ 0.86
SSR1-204ENST00000474597 ZDHHC11BP0C7U3 371 aa20.4■□□□□ 0.86
SSR1-204ENST00000474597 MYZAPP0CAP1 466 aa20.4■□□□□ 0.86
SSR1-204ENST00000474597 MX2P20592 715 aa20.4■□□□□ 0.86
SSR1-204ENST00000474597 ARL4CP56559 192 aa20.4■□□□□ 0.86
SSR1-204ENST00000474597 HIF1AQ16665 826 aa20.4■□□□□ 0.86
SSR1-204ENST00000474597 GPR65Q8IYL9 337 aa20.4■□□□□ 0.86
SSR1-204ENST00000474597 NACA2Q9H009 215 aa20.4■□□□□ 0.86
SSR1-204ENST00000474597 EPB41L4BQ9H329 900 aa20.4■□□□□ 0.86
SSR1-204ENST00000474597 PRDM12Q9H4Q4 367 aa20.4■□□□□ 0.86
SSR1-204ENST00000474597 XPO7Q9UIA9 1087 aaKnown RBP20.4■□□□□ 0.86
SSR1-204ENST00000474597 C5orf60A6NFR6 353 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 FGF10O15520 208 aaPredicted RBP20.39■□□□□ 0.86
SSR1-204ENST00000474597 GCATO75600 419 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 ACSL3O95573 720 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 KPNA1P52294 538 aaPredicted RBP20.39■□□□□ 0.86
SSR1-204ENST00000474597 ZNF844Q08AG5 666 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 PRKD1Q15139 912 aaPredicted RBP20.39■□□□□ 0.86
SSR1-204ENST00000474597 ANKRD22Q5VYY1 191 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 ARHGEF18Q6ZSZ5 1173 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 RELL1Q8IUW5 271 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 NETO2Q8NC67 525 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 UHMK1Q8TAS1 419 aaKnown RBP20.39■□□□□ 0.86
SSR1-204ENST00000474597 PKNOX2Q96KN3 472 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 BRD8Q9H0E9 1235 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 CENPHQ9H3R5 247 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 CCSER2Q9H7U1 834 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 SEPT10Q9P0V9 454 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 HS3ST4Q9Y661 456 aa20.39■□□□□ 0.86
SSR1-204ENST00000474597 CHADO15335 359 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 TTC4O95801 387 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 CTSAP10619 480 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 VAV1P15498 845 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 MAGEA4P43358 317 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 KRT71Q3SY84 523 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 PPP1R21Q6ZMI0 780 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 HERC6Q8IVU3 1022 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 CLP1Q92989 425 aaKnown RBP20.39■□□□□ 0.85
SSR1-204ENST00000474597 C1orf74Q96LT6 269 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 RAD9AQ99638 391 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 ZBP1Q9H171 429 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 MAFFQ9ULX9 164 aa20.39■□□□□ 0.85
SSR1-204ENST00000474597 GOLGA6CA6NDK9 693 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 E9PAM4 449 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 TLL1O43897 1013 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 HMBSP08397 361 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 GOLGA6DP0CG33 693 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 SYN1P17600 705 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 ATP5C1P36542 298 aaKnown RBP20.38■□□□□ 0.85
SSR1-204ENST00000474597 EPHB3P54753 998 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 NRG1Q02297 640 aaPredicted RBP20.38■□□□□ 0.85
SSR1-204ENST00000474597 TWF1Q12792 350 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 KYNUQ16719 465 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 NPWQ8N729 165 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 KLHL23Q8NBE8 558 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 HERVK_113Q902F9 699 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 ARL8AQ96BM9 186 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 P2RY11Q96G91 374 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 BTN2A3PQ96KV6 586 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 TTC25Q96NG3 672 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 MTIF3Q9H2K0 278 aaKnown RBP20.38■□□□□ 0.85
SSR1-204ENST00000474597 GOLGA6AQ9NYA3 693 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 NINJ2Q9NZG7 142 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 TRPM5Q9NZQ8 1165 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 DNMT3LQ9UJW3 386 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 NUP205Q92621 2012 aa20.38■□□□□ 0.85
SSR1-204ENST00000474597 A0A0A0MRY4 1105 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 TEX28O15482 410 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 SHBGP04278 402 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 ATP2A2P16615 1042 aaKnown RBP20.37■□□□□ 0.85
SSR1-204ENST00000474597 HOXC13P31276 330 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 TUBP50607 506 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 MLLT6P55198 1093 aaPredicted RBP20.37■□□□□ 0.85
SSR1-204ENST00000474597 PDIA2Q13087 525 aaKnown RBP20.37■□□□□ 0.85
SSR1-204ENST00000474597 MTA1Q13330 715 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 ANKRD20A2Q5SQ80 823 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 ANKRD20A1Q5TYW2 823 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 ANKRD20A3Q5VUR7 823 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 LRRC31Q6UY01 552 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 TMC7Q7Z402 723 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 CROCCP2Q86T23 111 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 C9orf72Q96LT7 481 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 SPATA13Q96N96 652 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 PHACTR1Q9C0D0 580 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 ETNK1Q9HBU6 452 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 TMBIM4Q9HC24 238 aa20.37■□□□□ 0.85
SSR1-204ENST00000474597 PLXNA4Q9HCM2 1894 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms