RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	HSF1	Q00613	529 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	FAM110C	Q1W6H9	321 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	PRTG	Q2VWP7	1150 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	ODF3L2	Q3SX64	289 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	CLEC9A	Q6UXN8	241 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	TFAP2D	Q7Z6R9	452 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	CERS3	Q8IU89	383 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	DCP1B	Q8IZD4	617 aa	Known RBP	4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	MYCT1	Q8N699	235 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	MPLKIP	Q8TAP9	179 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	HIC2	Q96JB3	615 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	ZNF479	Q96JC4	524 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	PPP1R10	Q96QC0	940 aa	Known RBP	4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	HIST1H2AA	Q96QV6	131 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	WDR24	Q96S15	920 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	POLR3GL	Q9BT43	218 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	NUAK2	Q9H093	628 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	MAGEH1	Q9H213	219 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	AGO4	Q9HCK5	861 aa	Known RBP	4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	LRFN1	Q9P244	771 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	FZD4	Q9ULV1	537 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	SLC27A6	Q9Y2P4	619 aa		4.12	□□□□□ -1.75
TMEM50B-208	ENST00000474272	TMEM272	A0A1B0GTI8	110 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	SLC22A23	A1A5C7	686 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	LACTBL1	A8MY62	500 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	DHH	O43323	396 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	CBFA2T3	O75081	653 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	NPPB	P16860	134 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	TNFRSF8	P28908	595 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	SERPINF1	P36955	418 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	GRK6	P43250	576 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	B4GALNT1	Q00973	533 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	HYAL1	Q12794	435 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	ATP1A4	Q13733	1029 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	PTK2B	Q14289	1009 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	PDCD2	Q16342	344 aa	Predicted RBP	4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	UBE2Q1	Q7Z7E8	422 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	PNPLA1	Q8N8W4	532 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	ANKRD42	Q8N9B4	389 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	FAM71D	Q8N9W8	422 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	OR1N1	Q8NGS0	311 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	PRPF18	Q99633	342 aa	Known RBP	4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	HERPUD2	Q9BSE4	406 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	ARL8B	Q9NVJ2	186 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	DACT1	Q9NYF0	836 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	MDFIC	Q9P1T7	246 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	ICK	Q9UPZ9	632 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	COL15A1	P39059	1388 aa		4.11	□□□□□ -1.75
TMEM50B-208	ENST00000474272	hCG_1642624	A0A1W2PR95	340 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	ZNF814	B7Z6K7	855 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	CCNT2	O60583	730 aa	Known RBP	4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	GLP2R	O95838	553 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	SYF2	O95926	243 aa	Known RBP	4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	VIP	P01282	170 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	NGFR	P08138	427 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	CD63	P08962	238 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	GALNS	P34059	522 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	PPAT	Q06203	517 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	KRTAP27-1	Q3LI81	207 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	TMEM63B	Q5T3F8	832 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	NUGGC	Q68CJ6	796 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	C18orf65	Q6ZTR6	163 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	B4GALNT4	Q76KP1	1039 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	TMEM199	Q8N511	208 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	SUN3	Q8TAQ9	357 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	STT3B	Q8TCJ2	826 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	GRAMD1A	Q96CP6	724 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	LMLN	Q96KR4	655 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	FCRL5	Q96RD9	977 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	KATNAL1	Q9BW62	490 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	FSCN3	Q9NQT6	498 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	TMOD4	Q9NZQ9	345 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	MSRB1	Q9NZV6	116 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	CA14	Q9ULX7	337 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	PCDHGB3	Q9Y5G1	929 aa		4.1	□□□□□ -1.75
TMEM50B-208	ENST00000474272	IFITM10	A6NMD0	228 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	CTIF	O43310	598 aa	Known RBP	4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	SNX2	O60749	519 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	EPN2	O95208	641 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	NTSR2	O95665	410 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	ADRA1D	P25100	572 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	HOXA7	P31268	230 aa	Predicted RBP	4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	HOXA11	P31270	313 aa	Predicted RBP	4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	PNLIPRP1	P54315	467 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	ZXDB	P98169	803 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	FOXO1	Q12778	655 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	MTAP	Q13126	283 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	CLCA4	Q14CN2	919 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	ACOX1	Q15067	660 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	ZNF628	Q5EBL2	1059 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	GRHL2	Q6ISB3	625 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	LDHAL6A	Q6ZMR3	332 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	RFX8	Q6ZV50	586 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	FAM57B	Q71RH2	274 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	GATAD2A	Q86YP4	633 aa		4.09	□□□□□ -1.75
TMEM50B-208	ENST00000474272	RASGRP3	Q8IV61	690 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms